Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00750 ATGGTTAGTGCAATAAAAGCAGCCACTGGAGATTTGGTGTTGACTTTCTTGTGGGTCTTCTTTTCCTCCATGTTGGGGTTGGTCACCGATGTCATAACAAAAGCGCTTGAAATTCATCATGCGTCCTACAATGGTTTTCATTACGCTGACTCTGTTGTCATCACTTCGCTCATCTTTATCCTCGTTACCATCTTCACCTTCATTGCCAATGCCTTGGGCGGTGCCAGCTTCAACCCCACCGGTAATGCTTCTCTCTACGCCGCTGGTGTTGGCGATGACACCCTTTTCTCAATGGCTCTCCGGTTCCCTGCTCAGGTACTGGGTTCAGTGGGTGGTGTTCTGGCTGTTATGGAGTATATGCCAGAGAAATATAGGCACTTCATTGCAGGGCCTTCTTTGAAGGTTAGCTTGCATACTGGAGCTCTAGCAGAAGGGGTGCTGACATTTGTGATCACATTTCTTGTTCTCCTCATCATGATCAGGGGTCCTCGCAGTGGCACCGCAAAGACTTTGTTGCTGGCAATCTCAACTGTGGTTTTGATCACTGTTGGTGCTAGTTACACTGGACCAGCTATGAACCCTGCCTTTGCATTTGGTTGGGCATACTTTGAGAAATGGCACGACAAATGGGACCACTTCTATGTATACTGGATCTGCCCATTCGTTGGATCAATACTAGCCGCATGGCTGTTCCGTATTGTCTTTCCCCCACCACCACCAGTAGAAAAACAGAAGAAAGCCTGA 744 0.4798 MVSAIKAATGDLVLTFLWVFFSSMLGLVTDVITKALEIHHASYNGFHYADSVVITSLIFILVTIFTFIANALGGASFNPTGNASLYAAGVGDDTLFSMALRFPAQVLGSVGGVLAVMEYMPEKYRHFIAGPSLKVSLHTGALAEGVLTFVITFLVLLIMIRGPRSGTAKTLLLAISTVVLITVGASYTGPAMNPAFAFGWAYFEKWHDKWDHFYVYWICPFVGSILAAWLFRIVFPPPPPVEKQKKA 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00750 247 Gene3D Glycerol uptake facilitator protein. 2 243 IPR023271 -
Vian8g00750 247 Pfam Major intrinsic protein 3 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vian8g00750 247 PANTHER AQUAPORIN SIP1-1 4 247 IPR044222 GO:0015250
Vian8g00750 247 FunFam Aquaporin SIP1-1 2 247 - -
Vian8g00750 247 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vian8g00750 247 PRINTS Major intrinsic protein family signature 58 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vian8g00750 247 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vian8g00750 247 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vian8g00750 247 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vian8g00750 247 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vian8g00750 247 SUPERFAMILY Aquaporin-like 4 241 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00750 Vian-Chr8 15245189 15249400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00750 2 246 Major Intrinsic Protein MIP AT5G18290 53.659 3.87e-85 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00750 K09875 - gmx:100803227 394.045