Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00713 ATGGTTCTTCAAAACGATATTGATTTGCTGAATCCTCCGGCTGAGTTGGAGAAGAGAAAGCACAAGCTCAAGCGTCTTGTTCAGATGTCAAGTGCCAAGGCTGCTTCAATATCCACTCTCAGACAGTTGTGGTATGTGGTAACTGCCAGACAGTGTTGTGCCAACCAACAGGTGGAAGAGCCAGGCCGAGCGCTTCCTTCTTTAGTGAGGGGTGGCGTGGTATTCCACGAGAGAGGGTATTCTATGTGGCGCACTCCTTTTAAGTTGAAGCGACAAGATTTACCCTACATCATAACAAAGTTGCTGCATATATATGCTCAAAAGGCTTCTATTGTCTATAGCTTAGATGTTGAGTCGTAG 360 0.4583 MVLQNDIDLLNPPAELEKRKHKLKRLVQMSSAKAASISTLRQLWYVVTARQCCANQQVEEPGRALPSLVRGGVVFHERGYSMWRTPFKLKRQDLPYIITKLLHIYAQKASIVYSLDVES 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00713 119 PANTHER 40S RIBOSOMAL PROTEIN S27 1 28 IPR000592 GO:0003735|GO:0005840|GO:0006412
Vian8g00713 119 Gene3D - 5 58 IPR023407 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00713 Vian-Chr8 13967276 13968713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00713 1 28 Cytoplasmic Ribosomal Protein Gene Family AT2G45710 100.000 2.68e-14 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00713 K02978 - pvy:116135107 53.1434