Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00701 ATGGCTCCTTCAGACTCTGAAACTTTGGGGCACCATTCTCAGATTCCGAGCTTTCTCTATTCCTGTCCCTCTCCGCCGCAGAAGAAGATGGAAGCTTCAAGCTTCGCGGTTCCTTCTCCCAGTGAGAAACGCAGCATAGAGATGTTTTCGCCGGCGTTCTACAGTGCTTGCACCATCGGAGGAATTCTCAGCTGTGGCCTCACGCACACCGCCGTCACGCCTCTTGACGTTGTCAAATGCAACATACAGATTGACCCTGTCAAGTACAAGAACACCAGCACAGGATTTGGAGTCATGTTTAAGGAGCAAGGACTGAGGGGGTTTTACCGCGGATGGGCACCTACCCTTGTTGGTTACAGCGCACAGGGTGCCTTCAAATATGGATTGTATGAGTACTTCAAGAAGTACTATTCTGACATAGCTGGTCCAGAGTATGCAACGAAGTACAAGACATTGATTTACCTAGCCGGTTCAGCATCTTCTGAGTTGATTGCTGATGTTGCTCTTTGCCCATTTGAGGCTGTGAAGGTCAGAGTTCAAACTCAGCCTGGCTTTGCTAGAGGCCTAGCTGATGGACTCCCAAAGTTAGTCAGAACTGAAGGTGTCTCAGGGTATGCTTATGATGTTATAATTGTTGTTAACTTAAATCTTCCCATTGTTTTGGTAAGAAGGTTGAGTGAAGCTGTGGTTCTGGATTCCTTGCAATTACTTTTCCATGCATTCACAGCTGTACAAGGGAATTATGCCTCTGTGGGGAAGACAGATACAATGATGAAATTTGCTTCTTTTGAGAACATAGTTGAGATGATCTACAAGCATGTCATCTCCAAACCAAAATATGAATGCAGCATTTCCCAGCAAGTAGGTGTGAGCATTGTCGGTGGATACATGGCTGGTATATTGTGTGCTGTCGTCTCCCATCCCGCTGATAATCTTGTCTCTTTCCTTAACAATTCCAAAGGGGCAAGCGTTGCTGATGCTGTAAAGAAGCTTGGACTATGGGGTATGTTTACCCGTGGTCTACCTCTTCGTATTCTTATGGTTGGAACTCTCACAGGAGCACAATGGGGAATATATGATTCATTCAAAGTTTTTGTGGGGCTGCCAACCACTGGCGGTGTTGCTCCTGCTCTTCCTCCTTCTGCTGCTTAG 1152 0.4644 MAPSDSETLGHHSQIPSFLYSCPSPPQKKMEASSFAVPSPSEKRSIEMFSPAFYSACTIGGILSCGLTHTAVTPLDVVKCNIQIDPVKYKNTSTGFGVMFKEQGLRGFYRGWAPTLVGYSAQGAFKYGLYEYFKKYYSDIAGPEYATKYKTLIYLAGSASSELIADVALCPFEAVKVRVQTQPGFARGLADGLPKLVRTEGVSGYAYDVIIVVNLNLPIVLVRRLSEAVVLDSLQLLFHAFTAVQGNYASVGKTDTMMKFASFENIVEMIYKHVISKPKYECSISQQVGVSIVGGYMAGILCAVVSHPADNLVSFLNNSKGASVADAVKKLGLWGMFTRGLPLRILMVGTLTGAQWGIYDSFKVFVGLPTTGGVAPALPPSAA 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00701 383 ProSiteProfiles Solute carrier (Solcar) repeat profile. 149 233 IPR018108 -
Vian8g00701 383 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 32 376 IPR044677 GO:0005315|GO:1990547
Vian8g00701 383 ProSiteProfiles Solute carrier (Solcar) repeat profile. 52 136 IPR018108 -
Vian8g00701 383 Gene3D Mitochondrial carrier domain 53 207 IPR023395 -
Vian8g00701 383 Pfam Mitochondrial carrier protein 152 204 IPR018108 -
Vian8g00701 383 Pfam Mitochondrial carrier protein 56 138 IPR018108 -
Vian8g00701 383 SUPERFAMILY Mitochondrial carrier 256 360 IPR023395 -
Vian8g00701 383 FunFam Phosphate carrier protein, mitochondrial 38 143 - -
Vian8g00701 383 SUPERFAMILY Mitochondrial carrier 55 205 IPR023395 -
Vian8g00701 383 ProSiteProfiles Solute carrier (Solcar) repeat profile. 286 365 IPR018108 -
Vian8g00701 383 Gene3D Mitochondrial carrier domain 243 367 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00701 Vian-Chr8 13619918 13622862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00701 12 383 Chloroplast and Mitochondria Gene Families AT3G48850 58.481 8.28e-165 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00701 K15102 - gmx:100804257 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01480 2 30697625 30700184 Vian8g00701 8 13619918 13622862 PCT