Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00692 ATGGAAAAGAACGTCAATGACAATTCTAGCAGTGTTCCTCATAAAGAGGAGAACATCAACACTGGCGAAACTACTCAGTTGCCGGTTCCGGAATCTGAAGACAAACCCGACACTAAATCCGATGCCAAACCCGAAGCCGAAGCCGAAGCCGAATCCGATGCGAAACCCGCCACCGAACCCGATGATGCCAAACCCGACGTGGAACCCGACGGCGAAACTGAAAAGGCCACAGATTCGGAAGGAGTTACTGAAAAGGAAGAATCCAAAGAAGAGGAGGAAAAAGAAAAGAAAGAAGAAACTGTCGAGGCTGAACCGGAATCTCCGGTTCCGAGTCTCGAGAAGGTTTTAGATGAGATTGACCAATTTCTCGTGACATTACAACAAAAAGTCCATGCCAAAGAATCAACACCATTGGAAATCCCTGATTTCATCCCCGTTTTCTTGCATCTGGTGGAACAGAAGATAGTGAAGTACGACACGGGTGAAATGAAATGGGGAGAAACAATTGAAGACGATTCCTCACTTTTGGGATGCGCGAATCGCATTTCAAGGCTGATGAACCATTTCATAGAGTACTCGCGATCTCATGCAGAGAAAGAACAAGAGGACGAGGAGAAGGTGACGGTCCGAATAGACTTCATGATCAACGGCGTCAGCGTGATTCAGCAGCGTGTGATGTCGTTTTTGGAGGACGAGTTCCGTACACTGATGTTAGAATCTAGAAACCCAAATAAACCAGACTCAAAGGGAAAACAACAGGTGGCAGACTCCTTAGAGTCGGAGCCACTCGAAGAAAGTATTCCCGAATTCCCAGGTTTCGCGGAGGAAGCCATTGCGAATCTGAACAGAATCGCCAAGGAAATGGTAGCCAGCGGTTACGAGAACGAGTGTTGCCAAGTCTACGCACTTTCGCGGAGGCATGCGTTTGAGGACGGCATGAACAAAATTCTTGGGTACGAGAAGCTCAGCATAGACGAGATTCAGAGAATGCAGTGGGAGACACTGGAGCGCGAAATCCCCACATGGATCAACACCTGGAAGGAGTGCACCTCTGTATGGTTCCCGGGAGAGCGAAAGCTAGTGGAAATGGTGTTCGGAAAGGAAGCTGACACCGTGGTGAGCCTCATGGGCAACATTTCCCGCTCAATTGTCATTCAGCTGCTTAATTTCGGGGAGAGCGTTGCCATGACAAAGCGCGCCGGCGAAAAACTCTTCAAACTCTTGGACATGTACGAGACTCTACGAGACGCCATTCCAATAATGGAGACCTTGTTCCCGGATGACATAATGGGGGAAATCAAGACCGAAACGACATCCGCAAAATGTCGTCTCGGCGAGGCAGCAGTGTTAATATTCTGCGACCTGGAGAATTCGATTAAATCGGAGACTGGAAGAACTCCGGTGGCGGGAGGCGCGGTTCATCCTCTGACACGTTATATCATGAACTACTTAAGGTTAGCGTGTGAGTATAAAGATACATTGGAGGAAGTGTTCAAAGAGCATTCGAAAATCGAGCGTGCGGATTCAACTAGCAGGCCTCGCTACGAAACCGAGGAGAGCAAATCGAAGAACGATAACAAACACAAAGAGGATGAGTCGCCGTTTGCAGCACAATTAATGCGGGTGATGGAACTTCTGGACTCGAATCTGGAGGGGAAGGCGAAGCTGTACAAGGAGGTTGCGTTGAGCTGCATTTTCATGATGAACAATGGAAGGTACATAGTGCAGAAGATAAAAGGTTCTGCGGAGATCTACCAAGTGATGGGAGAAACGTGGTGTCGTAAGAGATCGACGGAGCTGAGGACTTACCACAAGAACTACCAGGTGGAGACGTGGAGCAAGATTCTGAGCTACCTGAGCCCTAAAGGATTAAGCGATCACGGGAAGGTGCAGAAGCCGGTGCTGAAGGAGCGCTTCAAGGCGTTCAACGCAGCATTTGAGGAGATTCACAAGACGCAGAGCATGTGGGTGGTGAGCGATGAACAGCTTCAATCGGAACTTAGGGTTTCCATCTCTGCACTTGTTATTCCTGCGTACAGATCCTTCTTGGGGAGGTTTTCGCAGTATTTGGACCCGGGCAGACAAACCGAGAAGTATGTAAAGTACCAAGCTGAGGATATAGAGACTTACATTGACGATTTGTTCGACGGGAACGCGCACGGGCGTCGCTAG 2172 0.4894 MEKNVNDNSSSVPHKEENINTGETTQLPVPESEDKPDTKSDAKPEAEAEAESDAKPATEPDDAKPDVEPDGETEKATDSEGVTEKEESKEEEEKEKKEETVEAEPESPVPSLEKVLDEIDQFLVTLQQKVHAKESTPLEIPDFIPVFLHLVEQKIVKYDTGEMKWGETIEDDSSLLGCANRISRLMNHFIEYSRSHAEKEQEDEEKVTVRIDFMINGVSVIQQRVMSFLEDEFRTLMLESRNPNKPDSKGKQQVADSLESEPLEESIPEFPGFAEEAIANLNRIAKEMVASGYENECCQVYALSRRHAFEDGMNKILGYEKLSIDEIQRMQWETLEREIPTWINTWKECTSVWFPGERKLVEMVFGKEADTVVSLMGNISRSIVIQLLNFGESVAMTKRAGEKLFKLLDMYETLRDAIPIMETLFPDDIMGEIKTETTSAKCRLGEAAVLIFCDLENSIKSETGRTPVAGGAVHPLTRYIMNYLRLACEYKDTLEEVFKEHSKIERADSTSRPRYETEESKSKNDNKHKEDESPFAAQLMRVMELLDSNLEGKAKLYKEVALSCIFMMNNGRYIVQKIKGSAEIYQVMGETWCRKRSTELRTYHKNYQVETWSKILSYLSPKGLSDHGKVQKPVLKERFKAFNAAFEEIHKTQSMWVVSDEQLQSELRVSISALVIPAYRSFLGRFSQYLDPGRQTEKYVKYQAEDIETYIDDLFDGNAHGRR 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00692 723 Gene3D Exocyst complex component Exo70 158 723 - -
Vian8g00692 723 MobiDBLite consensus disorder prediction 1 111 - -
Vian8g00692 723 MobiDBLite consensus disorder prediction 239 266 - -
Vian8g00692 723 PANTHER EXOCYST COMPLEX PROTEIN EXO70 127 717 IPR004140 GO:0000145|GO:0006887
Vian8g00692 723 Coils Coil 82 102 - -
Vian8g00692 723 MobiDBLite consensus disorder prediction 503 533 - -
Vian8g00692 723 MobiDBLite consensus disorder prediction 30 104 - -
Vian8g00692 723 FunFam Exocyst subunit Exo70 family protein 159 723 - -
Vian8g00692 723 SUPERFAMILY Cullin repeat-like 169 716 IPR016159 -
Vian8g00692 723 MobiDBLite consensus disorder prediction 1 28 - -
Vian8g00692 723 Pfam Exo70 exocyst complex subunit 342 713 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00692 Vian-Chr8 13308588 13310759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00692 31 719 EXO70 exocyst subunit family AT5G13990 48.544 0.0 635