Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00686 ATGGCTGCCAACACATTGATGAGCTCTGCTATCACAGCTTTCCCTTCTCTCCTTTCTTCCTCAAAATCAAGGTTTGCCTCAGCAGTCCCCATTTCCAGCTTTGGCACCAATGTCTCTTCTAGGTTTTCCATGACTGCTGATTGGATGCCTGGCCAGCCTAGACCCCCTTACCTTGATGGTTCAGCACCAGGTGACTTTGGATTCGACCCTCTTCGTCTTGGTGAAGTGCCAGAGAATCTTGAGAGGTTCAAAGAATCAGAACTCATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTTCCGGAGGCATTGGGCTTAGGAAACTGGGTAAAGGCTCAGGAATGGGCTGCAGTTCCTGGTGGCCAAGCCACCTACCTAGGAAACCCAGTTCCATGGGGCACACTACCCACCGTTCTGGTCATTGAATTCCTTGCTATTTCCTTTGTGGAGCACCAAAGGAGCATGGAGAAAGACCCAGAGAAGAAGAAATACCCTGGTGGTGCTTTTGATCCTTTGGGATACTCCAAGGACCCTAAAGCATTCCATGAATACAAAGTCAAAGAACTTAAGAATGGACGTCTTGCTTTGTTGGCTTTTGTGGGATTCTGTGTTCAACAATCAGCTTATCCTGGAACTGGACCTTTGGAGAACTTGGCTACTCACTTGGCTGACCCATGGCACAACAACATCGGAAACATCATTATTCCACAATCGATTTTGCCTTGA 735 0.4803 MAANTLMSSAITAFPSLLSSSKSRFASAVPISSFGTNVSSRFSMTADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGNPVPWGTLPTVLVIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKAFHEYKVKELKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGNIIIPQSILP 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00686 244 Gene3D Chlorophyll a/b binding protein domain 49 235 - -
Vian8g00686 244 Pfam Chlorophyll A-B binding protein 55 209 IPR022796 -
Vian8g00686 244 SUPERFAMILY Chlorophyll a-b binding protein 39 238 - -
Vian8g00686 244 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 45 236 IPR001344 GO:0009765|GO:0016020
Vian8g00686 244 FunFam Chlorophyll a-b binding protein, chloroplastic 49 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00686 Vian-Chr8 12986771 12988760 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00686 1 196 Chloroplast and Mitochondria Gene Families AT3G54890 81.313 1.51e-106 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00686 K08907 - gmx:100305992 475.322