Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00684 ATGTCATCCAAAGTTTATGAGCGAACTCTTGAGGAAACTCCAACATGGGCTGTTGCAGTTGTGTGTTTTGTGCTGCTTGCTGTTTCAATCGCCATAGAACATCTTATTCATGGTATTGGAAAGAAATCCATTGCTGATAGATGGAAATCTGAGACTAAGTATGAGTGGTTCAAGAAGAAACAAAAAAATGCTCTATTCGAAGCGTTGGAGAAGGTCAAAGGAGCTTATGGTGCTAGGATTCATATCCTTGCTCTTAAGTGTTTTGCAAGATCAAATTTCAAAGATCTGCGTGATAAAGTTGCTTTTGTTTCAGCATACGGGATTCACCAGCTGCATATATTCATCTTTGTGTTAGCAATATTTCATATCCTACAGTGCATTATAACACTGGGTTTGGGAAGAACCAAGATGAGAAAGTGGAGGGCATGGGAAAATGAAACCAAGACCATTGAATATCAATTTTACAACGATCCTGAGAGGTTCAGATTTGCAAGGGACACAACATTTGGAAGAAGACACTTGAATCCTTGGAGTCAGTCAACAATTTCCTTATCCATTCCCAGTCATATGGTTCTTTGCGGTGCTATTCCTTCTGACAAATACTCATGGATGGTATTCTTATTATTGGCTTCCATTCATCCCATTTGTTTGGGTGCTAAACTTCAAATGATAATAACAAAGATGGGACTGAGGATTACAGACAGAGGAGAAGTTGTCAAAGGTGCACCTCTGGTTGAACCAGGAGATGACCTCTTCTGGTTCAACCGTCCACGCCTCCTCCTCTTTTTGATTCATCTCGTGCTTTTCCAGAATGCTTTTCAACTGGCATTTTTCTCTTGGAGTACTTATGAATTCTCCCTACACTCTTGCTTCCACGAAACAACTGCAGATATTGTCATTAGACTTACAATGGGGGTTATCATACAAGTTTTATGCAGCTATGTGACACTACCTCTATATGCTCTAGTCACACAGATGGGTTCAACCATGAAACCTACCATCTTCAATCAGAGAGTGGCATCAGCACTGAAGAACTGGCACAACACGGCCAAAAAGCAAGTAAAAAACAGTAAGCCAACCACACCATTCTCAAGCAGGCCATCAACGCCAACCTATGGTATGTCTCCTATGCATCTGCTGCAAAAACACCTTGCTGGTAGAAGTGATAGTGCACAAACATCTCCTAGGACATCCAACTATGAAAATGAACAATGGGATATTGAAGGCTCACCTTCCAAAAGCAACCATGCAGCTGGTGAAGAAACTCAAATGCAAGTAATGGAGTCAGGCTCAAGCTCAGTCCCAGAATTGCCTACAAGCTCTCAGCTTGAAATCAGAGTTAGTTCATCAGAGTTTTCCTTTGAGAAGAGACATCATGGTGCAGAGACGAGAAGTGAAGATGATAGTTTTTATTAA 1416 0.411 MSSKVYERTLEETPTWAVAVVCFVLLAVSIAIEHLIHGIGKKSIADRWKSETKYEWFKKKQKNALFEALEKVKGAYGARIHILALKCFARSNFKDLRDKVAFVSAYGIHQLHIFIFVLAIFHILQCIITLGLGRTKMRKWRAWENETKTIEYQFYNDPERFRFARDTTFGRRHLNPWSQSTISLSIPSHMVLCGAIPSDKYSWMVFLLLASIHPICLGAKLQMIITKMGLRITDRGEVVKGAPLVEPGDDLFWFNRPRLLLFLIHLVLFQNAFQLAFFSWSTYEFSLHSCFHETTADIVIRLTMGVIIQVLCSYVTLPLYALVTQMGSTMKPTIFNQRVASALKNWHNTAKKQVKNSKPTTPFSSRPSTPTYGMSPMHLLQKHLAGRSDSAQTSPRTSNYENEQWDIEGSPSKSNHAAGEETQMQVMESGSSSVPELPTSSQLEIRVSSSEFSFEKRHHGAETRSEDDSFY 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00684 471 MobiDBLite consensus disorder prediction 450 471 - -
Vian8g00684 471 MobiDBLite consensus disorder prediction 350 375 - -
Vian8g00684 471 MobiDBLite consensus disorder prediction 350 471 - -
Vian8g00684 471 PANTHER MLO-LIKE PROTEIN 1 98 185 IPR004326 GO:0006952|GO:0016020
Vian8g00684 471 Pfam Mlo family 97 188 IPR004326 GO:0006952|GO:0016020
Vian8g00684 471 Pfam Mlo family 199 383 IPR004326 GO:0006952|GO:0016020
Vian8g00684 471 Pfam Mlo family 7 74 IPR004326 GO:0006952|GO:0016020
Vian8g00684 471 MobiDBLite consensus disorder prediction 386 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00684 Vian-Chr8 12945793 12951825 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00684 5 456 MLO family AT2G39200 43.373 2.57e-138 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00684 K08472 - gmx:100816112 455.677