Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00674 ATGGTGATTGTGACAACCCTTTTGGTTATATTTGTGAGTGTGGTGTTGAAGGTTGGCTATGACACCATTTCATGTTACTGGCTGACTCCAATGCGCATAAGGAAGATGATGAAGAAACAAGGTGTGCATGGTCCTAAACCCAGTTTTCTCATTGGCAACATCACAGAAATGACATCTCTTGTTTCAAGAGCAGTTTCTCAAGACATGAAAACTATCAGCCATGATATTGTTGCTCGTATTTTGCCACATTTTGTTGTCTGGTCCAACCAATATGTGTGCGTGGAGAGAATTTTGAGTTATTTTCTGGAAAGTTTAAGAGGCAAGAAATATCGCATCGAACGAAGACCCTGCAACAGGGAAGTTGTCGACGTTGATACTCGTAGGAAAACTCATCGACGGTACAACTCCATGTCTGGAAAATCATGGCAACAACAACAAGGTACCAAACATTTCATTGGGAAAGGGTTGTTGATGGCCAATGGTAAAGATTGGCAGTACCAACGTCACATGGTTGCCCCAGCGTTCATGGGAGAGAGACTTAAGCTTCAGACTCGTTGTGCTCAAGCAACTCGCCATCTTTTCCTTCCTGGAAGCAGCAAGTACAATAGAGAGATAAAGAGTTTGAAGATGGAGGTGGAGAAACTGTTGATGGAGATGATAAAGGGTAGGGAAGATTGTGTGGAGAAAGGGAGAAGCAATTCATATGGGAATGATTTATTGTGTATACTCTTGGATGAGATGAAGAAAGAAAGTGGTAGCTTGAATATTCAACTAGTTATGGATGAATGCAAAACATTTTTCTTTGCTGGTCATGAAACCACTGCTCTCTTACTCACTTGGACAGTCATGTTGCTAGCAACAAATCCTCATTGGCAAGACAAAGTCAGAGCTGAAGTCAAACACATTTTCAAAGGGGAAACTCCATCACTTGATAAACTCTCCAAGCTCACTCTGTTACAGATGGTGATAAACGAGGCAATGAGATTGTATCCTCCTGCAACTGTGCTTCCGAGAATGGTTTTCGAAGATATTGAGTTGGGAGATCTCCACATTCCTAAGGGCTTATCAATTTGGATTCCAGTGTTGGCCATTCACCATAGTGAAGAACTGTGGGGTGAAGATGCAAACGAGTTCAACCCTGAGAGGTTTGCTTCAAAATCATTCATATCTGGTCGCTTCATACCCTTTGGTTCTGGCCCTAGAAACTGTGTTGGACAATCATTTGCCATGATGGAGGCCAAGATCATACTAGCCATGTTCATATCTCAGTTTAGCTTCACCATTTCTCAGAGTTATAAGCATGCACCAGTGCTTCTCCTCACAATTAAACCTAAATATGGTGTTCAAGTTTGTTTGAAGCATTTAGATCCATAA 1374 0.417 MVIVTTLLVIFVSVVLKVGYDTISCYWLTPMRIRKMMKKQGVHGPKPSFLIGNITEMTSLVSRAVSQDMKTISHDIVARILPHFVVWSNQYVCVERILSYFLESLRGKKYRIERRPCNREVVDVDTRRKTHRRYNSMSGKSWQQQQGTKHFIGKGLLMANGKDWQYQRHMVAPAFMGERLKLQTRCAQATRHLFLPGSSKYNREIKSLKMEVEKLLMEMIKGREDCVEKGRSNSYGNDLLCILLDEMKKESGSLNIQLVMDECKTFFFAGHETTALLLTWTVMLLATNPHWQDKVRAEVKHIFKGETPSLDKLSKLTLLQMVINEAMRLYPPATVLPRMVFEDIELGDLHIPKGLSIWIPVLAIHHSEELWGEDANEFNPERFASKSFISGRFIPFGSGPRNCVGQSFAMMEAKIILAMFISQFSFTISQSYKHAPVLLLTIKPKYGVQVCLKHLDP 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00674 457 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 396 405 IPR017972 GO:0005506|GO:0016705
Vian8g00674 457 SUPERFAMILY Cytochrome P450 123 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00674 457 Coils Coil 198 218 - -
Vian8g00674 457 PRINTS P450 superfamily signature 269 286 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00674 457 PRINTS P450 superfamily signature 403 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00674 457 PRINTS P450 superfamily signature 321 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00674 457 PRINTS P450 superfamily signature 394 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00674 457 PRINTS E-class P450 group I signature 258 275 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00674 457 PRINTS E-class P450 group I signature 403 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00674 457 PRINTS E-class P450 group I signature 361 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00674 457 PRINTS E-class P450 group I signature 278 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00674 457 PRINTS E-class P450 group I signature 393 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00674 457 Pfam Cytochrome P450 197 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00674 457 PANTHER CYTOCHROME P450 FAMILY MEMBER 16 185 - -
Vian8g00674 457 Gene3D Cytochrome P450 28 193 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00674 457 Gene3D Cytochrome P450 194 456 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00674 Vian-Chr8 12674087 12685878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00674 1 317 Cytochrome P450 AT5G38450 46.565 2.08e-91 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00674 K10717 - ath:AT5G38450 533.487