Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00667 ATGGATCCCTCTCGCCGCGCCCCACGCGCCGTGATTGACCCCGTCCCCAAGTTCCGCCAAGTCGGGTTCTTTGCCCCGCCCGAACGCTCTCAATCGGGTCCTCCAAAGACGACCCACTCTTCGCCCCCAATCTCCAACTCCCTCTCGCCGGTCATGATCCCGCCGCCACGCCACCTATCGGACAACCTCCTCCTCCATGCGCCCCCCGCCTCATCTCCCCTTCGCGCAGACTCCGGCGGCGGCGGAAACTCCTTCGACAACGCGGACTTGTTCACCGCGCCGCTGTCGCCCGCTCTGCCATCGTCGTCGTACTCCAGCAGGATCGCCGGCGACTTCTACAAGGGAAACGGTGGGAAGGTGGCGGCCTCGTCTTTCCCCCGCGGAGGATTCGACCTGACGGCGATGAAGGCGGCGGCGGCCTCGAGCGTCGTCGTGCCTGCGAGCGAGCTGACCACGGTTTCGGTGGTGAATGATTCGTTAGGGATTCCCGAAAAAGAAAAAGGGAGCCGAGGAGGAGGGTCAGCAGTGGAAGTGAAAGAGCAACCTGCTAGTTCAAAACAGAAACCAAAAACCTCAAAAGCTGAAAGACGTGCCCTTCAAGAAGCTCAAAGAGCTGCAAAGGCTGCAGCAAAAGCTGAAGGAAATAAAGCATCTGGAACTGCAGCGCCAGCAAATGCCAAACCATCTAAAGCTGCAAAGCCTGCTCAGAAAATTGATAATGCAGCTGTTGCAGCCTCTGAAAAGAAGGGAGGTGAGATTCCACCAGAAAAGGATAGAAAAAAAGATGCTCCTCAACCACGGATGCAATACGATGACAAGAGCCGAGTGGAGAAAGCTAAACGTCGTGCAGTGGTAAAACAAACTGAAGCTAGGAACAGAGTTGAATTGTTCAGGCACTTGCCGCAATATGAACATGGGAGTCAGCTTCCAGATCTCGAGGCAAGGTTTTTCCATCTTTCTCCGGTGCACCCAGCTGTTTATAAGGTGGGTTTGCAGTATCTAACTGGAGATATGTCTGGTGCCAATGCTCGGTGTATTGCAATGCTTCAAGCATTTCAGGAGGCCATCAAAGACTACAAGGTTCCACAGGAGAAGACTCTTGTGAGGGACTTAACAGCAAAAATTAGTAGTTATGTATCATTTCTTATTGAGTGTCGACCTCTGTCTATCAGCATGGGAAATGCTATTAGGTTTCTCAAAAGTCGGATAGCCAAGTTACCTTTGACCTTGTCTGAATCAGAAGCAAAAGCTTCTCTCCATTCAGATATTGAGCGTTTTATTAGTGAGAAGATTATACTCGCCAACAAAGTGATAGTGAAGCATGCTGTCACCAAAATAAGAGATGGTGATGTTCTTCTAACGTATGGGTCCTCGACAGCTGTTGAAATGATACTATTACATGCACATGAGTTAGGAAGACAGTTTCGCGTTGTGGTAGTTGACTCTTGTCCAAAGCTTAGAGGGCAACTTTTGCTTCGCAGGCTGGTGGAGAAAGGTCTTAGCTGTACATACACTCATATAAATGCCGTTTCCTATATAATGCACGAAGTTACTCGAGTATTTCTGGGTGCTTCATCAGTTTTATCTAATGGAACAGTATATTCAAGAGTAGGGACTGCATGTGTTGCAATGGTTGCTCATGCATTCCGTGTACCTGTCATAGTATGTTGTGAGGCATATAAATTCCATGAACGGGTACAGTTGGACTCAATATGCTCTAATGAACTTGGTGATCCAGATGCAATTTCAAATGTATTGGGTAGAGAGGATGTCAACCACTTGGATGGCTGGGCCAATATTGAAAATCTGCAACTCTTAAATCTGATTTATGATGCAACACCTTCAGATTATGTTTCAATGATTGTCACAGATTATGGCATGGTTCCCCCTACAAGTGTGCCTGTAATTGTAAGAGAATACGGGAGAGAACAGGTCTGGATATAA 1944 0.4856 MDPSRRAPRAVIDPVPKFRQVGFFAPPERSQSGPPKTTHSSPPISNSLSPVMIPPPRHLSDNLLLHAPPASSPLRADSGGGGNSFDNADLFTAPLSPALPSSSYSSRIAGDFYKGNGGKVAASSFPRGGFDLTAMKAAAASSVVVPASELTTVSVVNDSLGIPEKEKGSRGGGSAVEVKEQPASSKQKPKTSKAERRALQEAQRAAKAAAKAEGNKASGTAAPANAKPSKAAKPAQKIDNAAVAASEKKGGEIPPEKDRKKDAPQPRMQYDDKSRVEKAKRRAVVKQTEARNRVELFRHLPQYEHGSQLPDLEARFFHLSPVHPAVYKVGLQYLTGDMSGANARCIAMLQAFQEAIKDYKVPQEKTLVRDLTAKISSYVSFLIECRPLSISMGNAIRFLKSRIAKLPLTLSESEAKASLHSDIERFISEKIILANKVIVKHAVTKIRDGDVLLTYGSSTAVEMILLHAHELGRQFRVVVVDSCPKLRGQLLLRRLVEKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGDPDAISNVLGREDVNHLDGWANIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIVREYGREQVWI 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00667 647 Pfam Initiation factor 2 subunit family 339 630 IPR000649 GO:0044237
Vian8g00667 647 MobiDBLite consensus disorder prediction 31 47 - -
Vian8g00667 647 MobiDBLite consensus disorder prediction 155 285 - -
Vian8g00667 647 MobiDBLite consensus disorder prediction 250 285 - -
Vian8g00667 647 MobiDBLite consensus disorder prediction 1 86 - -
Vian8g00667 647 SUPERFAMILY NagB/RpiA/CoA transferase-like 318 640 IPR037171 -
Vian8g00667 647 Gene3D - 433 640 IPR042529 -
Vian8g00667 647 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 39 644 - -
Vian8g00667 647 MobiDBLite consensus disorder prediction 183 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00667 Vian-Chr8 12408866 12417743 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00667 4 647 Eukaryotic Initiation Factors Gene Family AT5G38640 65.825 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00667 K03680 - gmx:100775998 1082.01