Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00663 ATGGGAAATAGGGTTCCTCTTTCGGTGCTTCTGGTTTTGGTAACAGTTTTACTTTCAATCTTTCACTCGGAGCAACTGCAATCCTCTCACTCGCAGACCTTCCTAAGAATTCAACGGCTATTGAACTTTCCAGCTGTTTTAAGCAGCTGGAACAACAACACAGACTTTTGCAGCACAGATTCAACATCTTCTCTCACTGTTGCTTGCTATGATGGCACCATAACCCAGCTGCACATTGTTGGTGAAACAAGATCTCCACTTCTCGCTAGAAATTTCTCAATAAATTCCTTTTTCACAACACTGGTTAGGCTTCCCAGTCTGAAAGTCCTCACTTTGGTTTCTCTTGGCATATGGGGTCCATTGCCTGGTAAGATTTCTCATTTGTCATCACTGGAAATTTTCAATGCGAGTTCAAATTTCTTATATGGTTCCATCCCTCAAGAGCTCTCGTTACTGTCACATCTCCAAACACTCATTCTAGATCACAACATGTTTTCTGGCCATCTTCCTGAATGGTTTGATTCCTTTCCAGCCTTAACTGTGTTAAGTTTGAAACACAACTTGTTCAATGGTTCACTTCCGGATTCACTGGGTAGCTTGGAGAATATGAGAATTCTTTCACTTTCTCATAACCACTTTTATGGACCAGTGCCTGATCTGCACCGTTTGACGAATCTCCAAGTGCTGGAATTGGATGATAATGGTTTTGGACCCCGGTTTCCCCAGCTTGGTGACAAACTAGTTACTCTAGTACTAAGAAACAACAAGTTCAGGTCCAGCATCCCTGATGAAATGAGCTCATGTTATCAACTTGAGAGACTTGACATCTCAGCAAACACATTTGTTGGACCGTTTCAACTAGCACTAATGTCACTGCCTTCTATTACTTATCTCAACATTTCTGGGAACAAATTAACAGGAATGCTTTTGGAGAATCTGTCTTGCAATTCTGGACTTCAAGCAGTGGATTTGTCCTCAAATCTTTTGACTGGGATCTTACCAAAATGTTTAATGTCAAATGCCAATGATAGGACTGTCTTGTATGCCAGAAATTGTCTAGAAGAGACAAATCAAAATCAGCATGCACTACCCTTTTGCCACACTGAAGCCATAGCTGTGGGAGTAGTACCTGAGGGAAAGAAGCACAAACCAGTATCTAAGGCAGTTCTCTCCCTTGGGATAGTATGTGGAACTTTTGGAGGAGTATCAATTATTGCACTGCTTTTTTTTATTATCAGAAGAAGAAATGTCAAAACAAAAACCAAGGATCCTCCTCCAACAAAATTAATATCTGAGAACGCAGCTTCTGGATATACCTCTAAGTTACTCTCTGATGCAAGGTATATATCTCAAACAATGAAGTTTGGAACAGTTGATCTGCCTCCTTATCGAGCTTTCTCACTGGATGAGATTGTAGCAGCTACAAACAACTTTGACTCGGCTTGTTTTATGGGTGAAGGTTCTCAGGGAAAGATGCACAGAGGTCAACTAAAGGATGGTTTACTTGTTGCCATTAGAAGTGTAAAAATCACCAAAAGCTTCAGCACTCAAGATTTTGTGCATAACATAGAGCAGATATTCAAATACAGACATCGTCATTTAGTCAGTGTTCTTGGACACTGCTTTGAATGTTATTTGGACGATTCAAGTGTCAGCAGCATATTTATTGTGTTTGAGTATGTTCCTAATGGCACACTCAAGAGCTGGATTTCAGATAGGCACTACAGAAAATCACTGACATGGACGCAACGCATAGAAGCTGCTATTGGAGTAGCAAAAGGCATCCAATATTTGCATGCAGGAATTGTTCCTGGTGTATATTCAAACAATCTCAAAATCACAGATGTTTTACTTGACCAAAATTTTGTTGCAAAAATCAAAATTTATGACCTGCCTTTGTTATCTCTCATGAGGAAGGTTGGACAAGGTAATCCTTCTAGAGAACTCAAAAGTCCTAGCACTAACAAAAATGTAAAACAGGAAGACGAGTCTGATGTATATGACTTTGGAGTAATCCTGCTGGAACTCATTCTAGGAAGGACAATAAAATCAAGGAATGTGGACACTTTAAAGGATCTGTTGCAAGCAAGCATAACAGCTGATGGTGAAGCTAGGAGGAGCATTATAGATCCAGCAGTTCGCAAGGTGTGCTTAGATCAATCGTTGAAGACAATGATGGAAATTTGTGTGAGGTGCCTAGTCAAAGAACCAGCAGAGAGACCCTCTAATGAGGATGTTTTGTGGAATCTGCAATTTGCAGCTCAAGTCCAAGATGCATGGGTAGGAGACTCTCAAAGTGGCAGTGATGACTCACCCATCTCACCTCTAGCATCTATACGAATGACCTTCCATTAG 2355 0.4064 MGNRVPLSVLLVLVTVLLSIFHSEQLQSSHSQTFLRIQRLLNFPAVLSSWNNNTDFCSTDSTSSLTVACYDGTITQLHIVGETRSPLLARNFSINSFFTTLVRLPSLKVLTLVSLGIWGPLPGKISHLSSLEIFNASSNFLYGSIPQELSLLSHLQTLILDHNMFSGHLPEWFDSFPALTVLSLKHNLFNGSLPDSLGSLENMRILSLSHNHFYGPVPDLHRLTNLQVLELDDNGFGPRFPQLGDKLVTLVLRNNKFRSSIPDEMSSCYQLERLDISANTFVGPFQLALMSLPSITYLNISGNKLTGMLLENLSCNSGLQAVDLSSNLLTGILPKCLMSNANDRTVLYARNCLEETNQNQHALPFCHTEAIAVGVVPEGKKHKPVSKAVLSLGIVCGTFGGVSIIALLFFIIRRRNVKTKTKDPPPTKLISENAASGYTSKLLSDARYISQTMKFGTVDLPPYRAFSLDEIVAATNNFDSACFMGEGSQGKMHRGQLKDGLLVAIRSVKITKSFSTQDFVHNIEQIFKYRHRHLVSVLGHCFECYLDDSSVSSIFIVFEYVPNGTLKSWISDRHYRKSLTWTQRIEAAIGVAKGIQYLHAGIVPGVYSNNLKITDVLLDQNFVAKIKIYDLPLLSLMRKVGQGNPSRELKSPSTNKNVKQEDESDVYDFGVILLELILGRTIKSRNVDTLKDLLQASITADGEARRSIIDPAVRKVCLDQSLKTMMEICVRCLVKEPAERPSNEDVLWNLQFAAQVQDAWVGDSQSGSDDSPISPLASIRMTFH 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00663 784 Gene3D Phosphorylase Kinase; domain 1 441 560 - -
Vian8g00663 784 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 451 560 - -
Vian8g00663 784 Pfam Protein tyrosine and serine/threonine kinase 484 747 IPR001245 GO:0004672|GO:0006468
Vian8g00663 784 SUPERFAMILY Protein kinase-like (PK-like) 458 752 IPR011009 -
Vian8g00663 784 Gene3D Ribonuclease Inhibitor 27 241 IPR032675 -
Vian8g00663 784 ProSiteProfiles Protein kinase domain profile. 478 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian8g00663 784 Gene3D Transferase(Phosphotransferase) domain 1 561 766 - -
Vian8g00663 784 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 561 766 - -
Vian8g00663 784 SUPERFAMILY L domain-like 77 353 - -
Vian8g00663 784 PANTHER UNNAMED PRODUCT 88 680 - -
Vian8g00663 784 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 245 - -
Vian8g00663 784 Pfam Leucine rich repeat 246 305 IPR001611 GO:0005515
Vian8g00663 784 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Vian8g00663 784 Gene3D Ribonuclease Inhibitor 242 360 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00663 Vian-Chr8 12337068 12341640 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00663 43 778 Miscellaneous Gene Families AT3G03770 61.456 0.0 868
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Vian8g00663 PK_Tyr_Ser-Thr 1.7e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00663 - - gmx:100813207 1318.91