Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00662 ATGCAAGTGAATCTCAATGGTAGAGTCCCTGAACGACAAATGCTAACGGCGGAAGAAAGTGGTCCCCCAAAGCGCTGCAACGCGAGAGAGCCTCCTCTGCTACAATGCGCAGAGCTGGTGCTACCCTACCTTAATCCTTCAGAACTTGCCAACGTCTCTCTCACCAGCAAACCACTTTTCAAACTCTCTCGCACCATCACCATCCGCCGCGCCTCCGACGCTTCCAGAACCTTCGAGACCCTTCCGATTCCGTTCCTCAACACGGTCGATTCCCACCCATACGCTCCCTTCCTCTACACGCGCTCCCTCGTTCTCTCCTCCCCACTCTCCCTCCTGCGCCAGCCCTGGGGCTCTTCGGCAGTTTCCCCCTCCGCGCAGTCTCGCCTTCTTAGCGCCGAGTCAGTGGGCTTCGTCGATGGCGAGGGCCGGGCCATGTCGGGCTGCGAGTGCGAGGCGTGCGATGGCGGTGAGTGTCCTTGTGCTGGCCTGGATGGGCTGGATGACGTTGGCAGAGAGTGCGGGCCCGGGTGCTGGTGTGGGCCTGAGTGTGGGAACAGGTTGACACGGAATGGGGTGGCGGTGAGGGTGAAGATTGTGAGGCATAGGAGGAAAGGATGGGGGTTGCATGCGGATCAGTTAATCGCGAAAAGTCAGTTTGTGTTTGAGTATGCAGGCCACCCCAGCTCTGGTGTTTCCAATAATGATATTAATCTTAAAATGACAGAGTTAACTGGTGAACTCTTGACAACGAAGGAAGCCCAGAGGAGACATCAATACTATGATGAACTGGCTTCTCAGGGTCGTTTCTCTTCAGCTCTTTTAGTTGTAAGGGAACATCTTCCTTCTGGAAAGGCATGTCTGAGATTAAATATTGATGCGACAAGATTAGGAAACATTGCACGATTTGTAAATCATTCATGTGATGGTGGTAATTTAAGCACAAAGCTAGTTAGAAGTTCAGGAGCTTTGTTGCCCCGCCTATGCTTCTTTGCTTCAAAAGATATCCCAGTAGATGAAGAGCTTACTTTTAGCTATGGAGAAATCAGGAAAAGGTCAAAGGGGTTGCCATGCTTTTGCAATAGCCCTTCATGCGTTGGAACGTTGCCCTCTGAAGACACATAA 1122 0.5205 MQVNLNGRVPERQMLTAEESGPPKRCNAREPPLLQCAELVLPYLNPSELANVSLTSKPLFKLSRTITIRRASDASRTFETLPIPFLNTVDSHPYAPFLYTRSLVLSSPLSLLRQPWGSSAVSPSAQSRLLSAESVGFVDGEGRAMSGCECEACDGGECPCAGLDGLDDVGRECGPGCWCGPECGNRLTRNGVAVRVKIVRHRRKGWGLHADQLIAKSQFVFEYAGHPSSGVSNNDINLKMTELTGELLTTKEAQRRHQYYDELASQGRFSSALLVVREHLPSGKACLRLNIDATRLGNIARFVNHSCDGGNLSTKLVRSSGALLPRLCFFASKDIPVDEELTFSYGEIRKRSKGLPCFCNSPSCVGTLPSEDT 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00662 373 Gene3D SET domain 56 355 IPR046341 -
Vian8g00662 373 MobiDBLite consensus disorder prediction 1 26 - -
Vian8g00662 373 ProSiteProfiles Post-SET domain profile. 353 369 IPR003616 -
Vian8g00662 373 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 71 362 - -
Vian8g00662 373 ProSiteProfiles SET domain profile. 194 346 IPR001214 GO:0005515
Vian8g00662 373 SUPERFAMILY SET domain 81 366 IPR046341 -
Vian8g00662 373 SMART set_7 194 352 IPR001214 GO:0005515
Vian8g00662 373 Pfam SET domain 205 346 IPR001214 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00662 73 368 Su(var)3-9 homologs AT1G73100 28.025 1.63e-20 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vian8g00662 SET 6.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00662 K11433 - gmx:100786871 507.679