Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00651 ATGGGTTTAGAACAAATAGAGCAACTCGTGCAGGGTACTGGAAGTCCACTGCAAAAAGATAGGAAAGTTTCCTGCCAAAGCAGACCCATTGGCATGAAGAAGACTTTGGTGTACTATAGAGGCCGAGCTCCTCAAGGAATCAGAACTGATTGGAACATGGCACACCGAACTAGCGACCATAGTCAAACACCTCAGGCTGATGTGTTTTCACAAGCTGTCGACCGAATGTTCAATGCGATGGAACGACAACATGTCGCTGAAGCGCCAAGGAATCATTCTGGTTTAAATGACTTCTTGAGACATGATTCCCCGAAATTCAATGGAAAGGCCACTCTAGACAAAGCTTAA 348 0.454 MGLEQIEQLVQGTGSPLQKDRKVSCQSRPIGMKKTLVYYRGRAPQGIRTDWNMAHRTSDHSQTPQADVFSQAVDRMFNAMERQHVAEAPRNHSGLNDFLRHDSPKFNGKATLDKA 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00651 115 MobiDBLite consensus disorder prediction 86 115 - -
Vian8g00651 115 ProSiteProfiles NAC domain profile. 1 79 IPR003441 GO:0003677|GO:0006355
Vian8g00651 115 MobiDBLite consensus disorder prediction 94 115 - -
Vian8g00651 115 MobiDBLite consensus disorder prediction 8 22 - -
Vian8g00651 115 Gene3D NAC domain 7 86 IPR036093 GO:0003677|GO:0006355
Vian8g00651 115 SUPERFAMILY NAC domain 17 54 IPR036093 GO:0003677|GO:0006355
Vian8g00651 115 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00651 Vian-Chr8 11987953 11994279 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00651 19 77 NAC Transcription Factor Family AT3G17730 59.016 7.64e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00651 - - var:108322099 108.997