Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00638 ATGGAAGGGCTCCAAGAAGGCTTTGTTGTAAAAGGGGGCATAAAATTGCCGATTGGGTTCAGGTTTCGTCCCACAGATCAAGAGCTTCTCCTTCACTACCTCAAGAAGAAGGCCTTTTCTCAACAGTTACCTGCTTCAGTCATTCCAATCTGTGATGTCTTTCAGTCTGAGCCATGGCTGCTTCCAGGTGATTTGAGGGAAAAAAGGTACTTTTTTAGCAATTGTGGAAAAGTGAACAAGAGAAGTGCAGGTTCAGGTTGTTGGAAATGTGTTGGAAAAGAAAAAGAAATAAGGGTTTGTAAAAACAATGAAGTAATTGGGATGAAGAAAACAATGATGTTCTGCAAAGGTTCCCATGAAACAAGAACTCGCTGGGTCATGCACGAATTGCGTCTTCTAACTTCCTACCCATATCATCAGATGGCAGTGGCAGATTTTGCTGTGTATGTCATATTTCAGAAAAGGAAGAAGATGACAAAAGCATCTCAGAAGAGACCCTTTTGTAGCAGCAAACTTCAGAGAGTACATGATGTTGAAGCTAGCATAATAGATTTTGAAATGGAATTTGGCCACGATAATAATGTGCTTCCGCCACCTTCTTCCCCATGTTGA 612 0.4134 MEGLQEGFVVKGGIKLPIGFRFRPTDQELLLHYLKKKAFSQQLPASVIPICDVFQSEPWLLPGDLREKRYFFSNCGKVNKRSAGSGCWKCVGKEKEIRVCKNNEVIGMKKTMMFCKGSHETRTRWVMHELRLLTSYPYHQMAVADFAVYVIFQKRKKMTKASQKRPFCSSKLQRVHDVEASIIDFEMEFGHDNNVLPPPSSPC 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00638 203 Gene3D NAC domain 25 160 IPR036093 GO:0003677|GO:0006355
Vian8g00638 203 SUPERFAMILY NAC domain 10 154 IPR036093 GO:0003677|GO:0006355
Vian8g00638 203 ProSiteProfiles NAC domain profile. 16 154 IPR003441 GO:0003677|GO:0006355
Vian8g00638 203 PANTHER NAC TRANSCRIPTION FACTOR 56 16 162 - -
Vian8g00638 203 Pfam No apical meristem (NAM) protein 17 132 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00638 Vian-Chr8 11784874 11787103 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00638 8 160 NAC Transcription Factor Family AT5G13180 42.857 9.35e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vian8g00638 NAM 8.2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00638 - - vun:114181461 345.895