Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00632 ATGGCGATAGAGAATAGCGAGAACAATAATGGGAGCAAGTTCACCGACAACAGTGGTGGAGAAGCAAAACACAAGAGAGAAGAGCGAGAGAAAGCGCTTAGGTCACATCCCACTCCAATGTGCAAATTGAAGCTGAAGATTCATTTCTCTGCAGCAGTTCCTGCTACTTCACTGACAGTGCCAGCTTCTGGGGTGACAGAATCCTTTGGTTTTTCTCACTCTGATAAAAAATTGCACTCTTCTGCTGTCATTTTTTACAAGCCCAATGATGATGGCTACAACTGGAGGAAGTATGGGCAGAAGAGTCTACAACTAGCCTTCCTTTAG 327 0.4465 MAIENSENNNGSKFTDNSGGEAKHKREEREKALRSHPTPMCKLKLKIHFSAAVPATSLTVPASGVTESFGFSHSDKKLHSSAVIFYKPNDDGYNWRKYGQKSLQLAFL 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00632 108 MobiDBLite consensus disorder prediction 1 37 - -
Vian8g00632 108 MobiDBLite consensus disorder prediction 18 37 - -
Vian8g00632 108 MobiDBLite consensus disorder prediction 1 17 - -
Vian8g00632 108 Gene3D WRKY domain 74 106 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian8g00632 108 Pfam WRKY DNA -binding domain 90 103 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian8g00632 108 SUPERFAMILY WRKY DNA-binding domain 86 103 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00632 Vian-Chr8 11695587 11697641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00632 35 104 WRKY Transcription Factor Family AT4G26640 36.620 1.41e-06 43.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vian8g00632 WRKY 0.00028 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00632 - - vun:114179749 87.4261