Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00584 ATGTTTCCAAATTTCAGAGATTGTCATCGTTTAAGTTTAATGCTGGAAGTTCTTGATCAAGAAGCAACAGCTCTTTATTCATTCAAATCACAAACTCAGAGGCTTGAAGCTCTTCATCAATTTAAATCAGGAAAGGTTTCTGTACTGCTAGCAACTGATGTTGCCAGTCGTGGATTGGATATTCCTACAGTTGACCTTGTTATCAACTATGATGTTCCAAGGTTTCCACGGGATTATATTCATCGGGTTGGTCGAACGGCAAGAGCCGGTAGAGGTGGACTGGCTTTGAGCCTTGTCACCCAGGTTTTCAGTGCTAAGAATGTAGCAGAAATGAGAATGATAGATGATGGCTTTGAGGAGAAAGCTAAAGAGCGGAAAAAACAGAAACTGAAAATGCTTGCAGAGAAAGGACTGTTGAAGAAAAATAAAAGGAGAAAAAAAAATAAAGAATTCTCAGAGCAAGGGAAAGAGGTTTTCGGTGCGAAGAATGTCGAGGAAATGAAGATGGGTAGCATTGAGAGGGAAACAAAAACTAGTGCTAAAAGAAAAAGGTTTGTTAATGAAAAAAAGTTAAATCAAAGAAGTAAAGAATTTGCACAGGGGAAGGAAAAAAACAGAAAAAAAGAGAATAGAGGCATCAGCTGA 645 0.3829 MFPNFRDCHRLSLMLEVLDQEATALYSFKSQTQRLEALHQFKSGKVSVLLATDVASRGLDIPTVDLVINYDVPRFPRDYIHRVGRTARAGRGGLALSLVTQVFSAKNVAEMRMIDDGFEEKAKERKKQKLKMLAEKGLLKKNKRRKKNKEFSEQGKEVFGAKNVEEMKMGSIERETKTSAKRKRFVNEKKLNQRSKEFAQGKEKNRKKENRGIS 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00584 214 Gene3D - 2 212 IPR027417 -
Vian8g00584 214 MobiDBLite consensus disorder prediction 139 214 - -
Vian8g00584 214 CDD SF2_C_DEAD 6 99 - -
Vian8g00584 214 SMART helicmild6 9 90 IPR001650 -
Vian8g00584 214 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 133 IPR001650 -
Vian8g00584 214 PANTHER RNA HELICASE 6 181 - -
Vian8g00584 214 Pfam Helicase conserved C-terminal domain 7 90 IPR001650 -
Vian8g00584 214 MobiDBLite consensus disorder prediction 148 214 - -
Vian8g00584 214 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 132 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00584 Vian-Chr8 10413110 10415315 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00584 22 128 Eukaryotic Initiation Factors Gene Family AT5G11170 39.252 1.70e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00584 K14778 - gmx:100804060 246.514