Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00581 ATGATGTGTTCCTCAGTTTTCGAGGGAAAGATACCCGCCAAGGTTTCACAGGAAATCTCTACAAATCTCTGTGGCAGAGGAATTCACACCTTCATCGATGACCACCACCTTCCCAGAGGGGACCAGATTTCCTCTGAACTTGAGAACGCAATCCAAGACTCCAGAATTTTCATCATTGTCCTCTCTCAAAACTATGCATCTTCCTCCTTCTGCTTAAATGAACTTCATTACATCCTGAGGTTTATTAAGCATAAGGGTCGGTTGGTTTTCCCAGTTTTTTATGGAGTTGACCCTTCTCATATTAGACACCACACAGGTACTTTTCGAGAGGCGTTGGCTCATCATCAAAACAATTCTTATTACAACTGGGAGAAGTTTGAGACATGGAAGATGGCTCTGCATCAAGTGGCTAACTTGTCTGGCTACCATTTCAAACATGGGGAAGGATATGAATATGAGTTCATTGAGAGGATTGTTGAGTTGGTCTGCAGCAAGATTAACCGTGCTGCTTTACATGTTGCGGATTACCCAGTTGGATTAGAGTCACAGGTGCTGGAAGTAAAGTTGCTTCTAGATGTTGGATGTGATGATGTTGTCCACATGGTGGGGTTCCATGGACTTGGTGGAGTAGGGAAAACGACACTTGCTGCTGCAGTTTATAATTCCATTGCTGACCATTTTGAAGCTTTATGTTTTCTTGAAAACGTGAGAGAAACTTCGAGCAAACATGGGTTACTGCATCTCCAAAGCAACCTTCTTTCTGAAACAGTAGGAGAGATTAAGTTAACAAGTGTCAAAAAGGGAATTTCTGTAATACAGCACAGGCTCCAGCAAAAGAAGGTTCTTTTGATTCTAGATGATGTTGACAAAGAGGAACAACTACAGGCACTTGCTGGAAGACCACATTGGTTTGGTCTAGGCAGTAGAGTCATCATAACAACTCGAGACAAACAGTTGCTAAAATGTCATCGGGTTAAAAGAACATACGAGGTGAAAGAATTGAATGAGGAAAATGCTCTTGAATTACTTACTTGGAAAGCTTTCAAGTTTGAACAATTTGATCCAAGTTACAAGGATGTTTTGAATCTGGCAGTAACTTATGCCTCAGGCCTTCCATTGGCTTTGGAAGTAATAGGTTCCAACTTATTTGGAAGAAATATAGAACAATGGAAGTATGCTTTGGATCAGTACAAGAAAATTCCTAAAATGGATATCCAGGACACACTTAAAGTGAGTTATGATGCTTTGGAAGAAGATGAACAGAGTGTTTTTCTTGACATTGCTTGTTTCTTCAAAAACTATGATTTGGCAGAGGTCGAAGATATACTTCGTGCTCATCATGGTCATAGCATTAAACATCATATTGATGTGTTGGTTGAAAAATCTTTCATAAAGATTAGTTTGGATGGTAAAGTGACACTACATAATTTGATAGAAGACATGGGTAGAGAAATTGTGCGGAGAGAATCACCCAAAGAGCCTGGGAAACGTAGCAGGTTATGGTTCCCTCAGGATATAGTTCAAGTTTTAGAAGACAATAAGGGAACTGCTCAGATTGAAATCATATGCGTGGATTTCCCTTCAGTTGAAGAAGTGGAAATAGAATGGGATGGAAATGCCTTCAAGAAGATGAGAAATCTCAGAACACTTATTATCAGAAATGGTCATTTCTCCAAAGGTCCAAAACATCTTCCTAATTCTTTGAGAGTGATGGAATGGTGGAGATATCCTTCACAGAATTTTCCACAGGATTTTCATCCGAAGAAACTTGCTATATTCAAGTTACCATACTGTGAGTTTACATCACTAGAGTTGACTGACTTATTAAGACAGAAGTTTGTGATTATGACAAGTTTAAATTTTGACGAATGTCGATATTTGAAACAGATACCTGATGTATCTTGTCTCATACATTTGGAAAATTTGTCATTTCGATGGTGTCCAAAATTATCTTCACTTCACTACTCAGTCGGGTTATTGGAAAAACTTAAAATCTTAGATGCAGAAGGTTGCTCCAGGCTCAAGAGTTTTCCTCCAATCAAGTTAACTTCTCTTGAGCAACTCAAACTTCGGTATTGTCACAGTCTTCAAAATTTTCCAGAAGTATTAGGAAACATGGAATATGTACGGGAACTTGACTTGAAAGAAACTCCTGTAAAAAAATTCCCACCTTCGTTTCGAAATCTTACACGGCTGCAAAAGTTACATCTGTGTTTGAGTGTTCGAGTAATGAAAAGTGGTTGTGATGGCCTTCCCCTTTCAAGCATTTGCATGATGCCAGAACTGGTTGATATTGCAGCAAATGAATGGGAAGGGGGGCTTTTCCGTGAAGCCAATGAGGGTGCAGAAAAAGTGAGCTCAATCTTGTCTACAAACGTTCAATATCTTCAACTCAGATGCTGCAACTTAACAGATGATTTTTTTCCAACACTTCTCCCATGGTTTGCTAATATGAAGAACTTAGACCTATCAGGGAATAATTTCACAGTCATTCCAGAATGCATCAAAGAATTCCACTTTTTAACCAGGCTTAATTTGAACTTTTGTGAGCGACTTCAAGAAATCAGAGGCATTCCTCCAAACCTGAAATATTTCTTTGCAATAGATTGCCAATCCTTGACTTCCTCGTGTAGAAGCATGTTACTAAATCAGGAACTGCATGAGGCTGGAAGCACCTTCTTTTATTTGCCAGGAGCCAAGATTGCAGAGTGGTTCGAGTTCCAAACATTGGAACTGCCAATTTCTTTCTGGTTTCGTGGTAAACTCCCAGCCATGGCTATTTGTCTTGCAATGGAACGAGTGTGTGAGTATTCCACATCAGAAGGTGGTAAATACAGACCCTTGGTGATCCATAGCACATTTAGATTCATGTCACCCATTGTGATCATCAATGGCAACGAACATTTGTTAGAAACTTGGGAGATGTTGGATGATTGCACTTGTGTTTTTGACCTGAGGGAGACAAAACTGAAAAATGATTTAGATGAAGAACTTGTGGAAAACGAATGGAACCATGTAGAGGTTACGTGTCGATATGTGAGTTTAGGCCAAACCTTAATAAAACATGGAATCCATGTATTTAAACAGGAAAGTAGCGTGGAAGAGATTCGATTCACTGATCCTTCCAGAAAAAGAAATCTTGATATGATGAACTCAATAGCTCAAAATCACAGCAGCAACAGTTGCTGA 3189 0.3939 MMCSSVFEGKIPAKVSQEISTNLCGRGIHTFIDDHHLPRGDQISSELENAIQDSRIFIIVLSQNYASSSFCLNELHYILRFIKHKGRLVFPVFYGVDPSHIRHHTGTFREALAHHQNNSYYNWEKFETWKMALHQVANLSGYHFKHGEGYEYEFIERIVELVCSKINRAALHVADYPVGLESQVLEVKLLLDVGCDDVVHMVGFHGLGGVGKTTLAAAVYNSIADHFEALCFLENVRETSSKHGLLHLQSNLLSETVGEIKLTSVKKGISVIQHRLQQKKVLLILDDVDKEEQLQALAGRPHWFGLGSRVIITTRDKQLLKCHRVKRTYEVKELNEENALELLTWKAFKFEQFDPSYKDVLNLAVTYASGLPLALEVIGSNLFGRNIEQWKYALDQYKKIPKMDIQDTLKVSYDALEEDEQSVFLDIACFFKNYDLAEVEDILRAHHGHSIKHHIDVLVEKSFIKISLDGKVTLHNLIEDMGREIVRRESPKEPGKRSRLWFPQDIVQVLEDNKGTAQIEIICVDFPSVEEVEIEWDGNAFKKMRNLRTLIIRNGHFSKGPKHLPNSLRVMEWWRYPSQNFPQDFHPKKLAIFKLPYCEFTSLELTDLLRQKFVIMTSLNFDECRYLKQIPDVSCLIHLENLSFRWCPKLSSLHYSVGLLEKLKILDAEGCSRLKSFPPIKLTSLEQLKLRYCHSLQNFPEVLGNMEYVRELDLKETPVKKFPPSFRNLTRLQKLHLCLSVRVMKSGCDGLPLSSICMMPELVDIAANEWEGGLFREANEGAEKVSSILSTNVQYLQLRCCNLTDDFFPTLLPWFANMKNLDLSGNNFTVIPECIKEFHFLTRLNLNFCERLQEIRGIPPNLKYFFAIDCQSLTSSCRSMLLNQELHEAGSTFFYLPGAKIAEWFEFQTLELPISFWFRGKLPAMAICLAMERVCEYSTSEGGKYRPLVIHSTFRFMSPIVIINGNEHLLETWEMLDDCTCVFDLRETKLKNDLDEELVENEWNHVEVTCRYVSLGQTLIKHGIHVFKQESSVEEIRFTDPSRKRNLDMMNSIAQNHSSNSC 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00581 1062 Gene3D - 333 417 IPR042197 -
Vian8g00581 1062 Gene3D - 7 166 IPR035897 -
Vian8g00581 1062 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 142 IPR035897 -
Vian8g00581 1062 Gene3D Ribonuclease Inhibitor 510 772 IPR032675 -
Vian8g00581 1062 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 864 IPR044974 GO:0006952
Vian8g00581 1062 Pfam TIR domain 17 165 IPR000157 GO:0007165
Vian8g00581 1062 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 427 IPR027417 -
Vian8g00581 1062 Gene3D Ribonuclease Inhibitor 781 888 IPR032675 -
Vian8g00581 1062 PRINTS Disease resistance protein signature 658 674 - -
Vian8g00581 1062 PRINTS Disease resistance protein signature 201 216 - -
Vian8g00581 1062 PRINTS Disease resistance protein signature 368 382 - -
Vian8g00581 1062 PRINTS Disease resistance protein signature 275 289 - -
Vian8g00581 1062 SMART till_3 7 139 IPR000157 GO:0007165
Vian8g00581 1062 SUPERFAMILY "Winged helix" DNA-binding domain 404 511 IPR036390 -
Vian8g00581 1062 Pfam NB-ARC domain 185 414 IPR002182 GO:0043531
Vian8g00581 1062 Gene3D - 167 328 IPR027417 -
Vian8g00581 1062 SUPERFAMILY L domain-like 534 879 - -
Vian8g00581 1062 ProSiteProfiles TIR domain profile. 1 166 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00581 Vian-Chr8 10316035 10319824 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00581 19 737 WRKY Transcription Factor Family AT4G12020 29.719 4.59e-74 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00581 - - gmx:100784366 1545.41