LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian8g00573	ATGCCGACCGTGGCCGTGAAACTCTACAGCGTCTTCTTTAAGTTTCTCCTAAAGAACCGTTTGCAGAACCAGATCCATGCCCCGTCCGAAGAATCCAACCAGTTCGGTGTTACGACCCGACCCGACGAGTCCGTCGCCGCCGCCAACCCCTCCTTCTCAGACGGCATCGCCACCAAAGATATCCACATCGATCCCGTGACCTCCCTCTCCGTCCGAATCTTCCTCCCCGATTCCGCACTCTCTCCCGAACCCAAATCCAAAACTATCTACAAATCCGAACCTGGATCCGCGGGGAACCTTGAAACGGCGTCGTCGCGCGCGGTGCGGCGAAATAGCTACGAGCCCTCAGTGTTTACGCCGCGGGAGGAGACGAGGCGGAGCAGCGCCGGGGAGTACCGGGGGTACTTGCCGGCGGCGGACGGTCGCCGGAAAAAGTTACCGGTGGTGTTACAGTTCCACGGCGGGGGGTGGGTGAGCGGGAGCAATGATTCGGTGGCGAACGATATGTTCTGCCGGAGGATTGCGAAGCTCTGCGACGCGGTGGTTGTGGCGGTCGGCTACCGGCTGGCGCCGGAGAATCGGTTCCCGGCGGCGTTTGAGGACGGGGTGAAGGTGCTGAATTGGCTGGCGAAGCAGGCAAATTTAGCGGAGTGTAGTAAGTCGTTGGGAGGGAGGAAATTTGAGGGTCATCACAAGCATATTGTTGATTCTTTTGGAGCGTCAGTAGTTGAACCTTGGTTGGCTGCTCATGCAAATCCATCAAGATGTGTTCTTCTTGGTGCGAGTTGTGGTGCAAATATTGCAGACTATGTGGCTCGGAAAGCTGTAGAAGCAGGTTCACTTCTGGACCCGGTCAAGGTGGTGGCACAGGTCCTGATGTATCCATTTTTTATTGGAAGTGTGCCCACTCATTCTGAAATAAAGTTGGCAAACTCTTACTTTTATGACAAGGCCATGTGTATGCTAGCATGGAAACTATTTCTACCAGAGGGGGAGTTTAGCCTAGACCATCCAGCTGCCAATCCCCTTGTCCCAGGCCAGGGACCTCCTTTAAAGCAAAGACCTCCAACATTGACAGTGGTGGCAGAACACGATTGGATGAGGGACCGTGCAATTGCATATTCAGAGGAGCTTAGGAAGGTGAATGTTGATGCACCTGTTTATGAGTATAAAGATGCAGTCCATGAATTTGCAACACTTGACATCCTTATCAAAAGCCCTCAGGCCCAGGTTTGTGCTGAGGACATTGCCATCTGGGTCAAGAAATATATTTCCCTTCGAGGTCACGAATTCTCATATTGA	1302	0.533	MPTVAVKLYSVFFKFLLKNRLQNQIHAPSEESNQFGVTTRPDESVAAANPSFSDGIATKDIHIDPVTSLSVRIFLPDSALSPEPKSKTIYKSEPGSAGNLETASSRAVRRNSYEPSVFTPREETRRSSAGEYRGYLPAADGRRKKLPVVLQFHGGGWVSGSNDSVANDMFCRRIAKLCDAVVVAVGYRLAPENRFPAAFEDGVKVLNWLAKQANLAECSKSLGGRKFEGHHKHIVDSFGASVVEPWLAAHANPSRCVLLGASCGANIADYVARKAVEAGSLLDPVKVVAQVLMYPFFIGSVPTHSEIKLANSYFYDKAMCMLAWKLFLPEGEFSLDHPAANPLVPGQGPPLKQRPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVYEYKDAVHEFATLDILIKSPQAQVCAEDIAIWVKKYISLRGHEFSY	433

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian8g00573	433	MobiDBLite	consensus disorder prediction	31	46	-	-
	Vian8g00573	433	Pfam	alpha/beta hydrolase fold	149	398	IPR013094	GO:0016787
	Vian8g00573	433	PANTHER	ARYLACETAMIDE DEACETYLASE	53	398	-	-
	Vian8g00573	433	MobiDBLite	consensus disorder prediction	31	51	-	-
	Vian8g00573	433	MobiDBLite	consensus disorder prediction	82	130	-	-
	Vian8g00573	433	SUPERFAMILY	alpha/beta-Hydrolases	113	424	IPR029058	-
	Vian8g00573	433	Gene3D	alpha/beta hydrolase	20	427	IPR029058	-
	Vian8g00573	433	MobiDBLite	consensus disorder prediction	92	112	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian8g00573	Vian-Chr8	10153675	10162927	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vian8g00573	1	433	Carbohydrate Esterase	AT3G27320	72.297	0.0	641

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian8g00573	-		-	gmx:100809142	744.191