Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00533 ATGATTTGGATGGAATTCGAAGAGAGGTACAGCTTGATTGATCATCCAAATGTTTTACAGGCACATTGCTCTTTTACTACTGGACACAATCTATGGGTTGTAATGCCATACATGGCAGGGGGTTCTTGCCTCCATATAATGAAATCTGCCTATCCAGAAGGTTTTGAAGAGCCAGTTATTGCTACTTTATTACATGAAGTTCTCAAAGCTCTTGTTTATCTTCATGCCCATGGTCACATACATAGAGATGTTAAGGCGGGGAATATTCTGCTTGATTCTAATGGTGCTGTCAAACTAGCTGACTTTGGAGTGTCAGCATGTATGTTTGATACTGGAGACAGGCAACGTTCAAGGAACACTTTTGTTGGAACACCTTGCTGGATGGCTCCCGAAGTCTTGCAGCAATTACATGGATATGATTTTAAAGCAGATATATGGTCATTTGGTATACAGCACTTGAACTTGCTCATGGTCATGCCCCATTTTCCAAGTATCCACCTATGA 504 0.4107 MIWMEFEERYSLIDHPNVLQAHCSFTTGHNLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLHEVLKALVYLHAHGHIHRDVKAGNILLDSNGAVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQQLHGYDFKADIWSFGIQHLNLLMVMPHFPSIHL 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00533 167 Gene3D Phosphorylase Kinase; domain 1 8 39 - -
Vian8g00533 167 ProSiteProfiles Protein kinase domain profile. 1 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian8g00533 167 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 11 155 IPR047173 GO:0043539
Vian8g00533 167 SUPERFAMILY Protein kinase-like (PK-like) 11 165 IPR011009 -
Vian8g00533 167 Gene3D Transferase(Phosphotransferase) domain 1 41 166 - -
Vian8g00533 167 Pfam Protein kinase domain 13 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian8g00533 167 SMART serkin_6 4 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00533 Vian-Chr8 9085466 9086792 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00533 11 155 MAP Kinase Kinase Kinase Kinase AT5G14720 91.724 3.92e-101 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Vian8g00533 Pkinase 6.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00533 K08835 - mof:131168488 290.812