Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00517 ATGACAAAGAAGCCGAAGCAGCGCCCTGCACCGGTGGAAGATCCTTCAACTGCTTCCTCCTCCGAATCTGAGGAAGATGATGACCGACCGCATTCTTCTCAACAGCATGCAGCAGCACCACAGGTTTCTTCCTCTGAAGAGGAAGACGATTCTTCAGAAGAAGACGAGAAGAAACTTTCCACTCTCCCTGCTTCTGCAAACCATCCCTCCAAGCCTCACCCCAAGTCCTACTCATCTGAATCCGAACCCGACACTGACTCGGAACCAGCTCGAGTCAAACCCAAACCGAAGCCCACGGACCTACCCCAGCCCAAGGTCCAAGCCCAGCGTTCCTCCACGCCGGTGAAACCGGGATCCAAGCGCCCAGCCCACGTAACTGAGCCGAAACGCGCGAAAAAGAAACCAGCTGAGGCTCCTTCTCCCTCCGTTGCTAACGACGAGACAGAGGAGGACGGGAAGAAGTCCGGCGGGCAAACGAGGGTGTTGTTCCAGAGGATCTGGAGCGAAGAAGACGAGGTCGGCATTCTTAAGGGCATACTTGAGTTCATCTCAAAGACCGGACAAGAGGCTTATAGGTACGTCGACGCTTTCCACAACTTCATTAAGAAGTCACTCCACGTGGAGGTTTCCAGCCATCAGCTGAAGGAGAAGATTCGACGGATGAAGAAGAAGTTCGAGACTCGTGAGGCGAAAAAGAAGAAAGGGATTTGGCCTCGGTTGTTGAGGCCTCACGACCGGGCCGTGTATGAATTATCCAAGAAGATTTGGGGTGAATGGCCCAACGGACTGGTGGAAAAGCCCAAGCCTCTTGCGAAATACGTTACCAAGACTCAAAAGAAGGAATCAAAAGCCGAGGACAAAGTTCCGTCGCAGCCATCAGCGCCGCTGCTGGCGTTGCCGGCGCCTGAAAGTTGTGACGTGAGTTTGCTTTACAGCAGTATTTCTTGTTTTAAAGAGCTGGATGAGGATGAGATGAAGAGAGGACTTACTTTGATTGGAGAATCCAAGAGGAAGGAATTGGAGAGAAGGTGGAAAGTGTTGCAATATTCTGAGATGGAGCTACTTGCGAATCGCTCTCTACTGATTGGGGAGCAGATTAAGTTGGTATCTGAAGCCCTACAATCATCCAACAATTAG 1137 0.5154 MTKKPKQRPAPVEDPSTASSSESEEDDDRPHSSQQHAAAPQVSSSEEEDDSSEEDEKKLSTLPASANHPSKPHPKSYSSESEPDTDSEPARVKPKPKPTDLPQPKVQAQRSSTPVKPGSKRPAHVTEPKRAKKKPAEAPSPSVANDETEEDGKKSGGQTRVLFQRIWSEEDEVGILKGILEFISKTGQEAYRYVDAFHNFIKKSLHVEVSSHQLKEKIRRMKKKFETREAKKKKGIWPRLLRPHDRAVYELSKKIWGEWPNGLVEKPKPLAKYVTKTQKKESKAEDKVPSQPSAPLLALPAPESCDVSLLYSSISCFKELDEDEMKRGLTLIGESKRKELERRWKVLQYSEMELLANRSLLIGEQIKLVSEALQSSNN 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00517 378 MobiDBLite consensus disorder prediction 122 136 - -
Vian8g00517 378 PANTHER BNAANNG10740D PROTEIN-RELATED 29 371 IPR007592 GO:0006355
Vian8g00517 378 Pfam Protein of unknown function, DUF573 163 257 IPR007592 GO:0006355
Vian8g00517 378 MobiDBLite consensus disorder prediction 75 95 - -
Vian8g00517 378 MobiDBLite consensus disorder prediction 1 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00517 Vian-Chr8 8749134 8750270 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00517 79 372 GeBP Transcription Factor Family AT1G61730 29.154 2.86e-28 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vian8g00517 DUF573 2.8e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00517 - - vun:114182157 527.709