Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00508 ATGGCACGTTCCATCTATAACACCAAACCATTACACAGGAAACTACTTCTCCTCAACATATCCTTCATTTTCCTCGTCTGTCTCTTCCTCAATGCCTATCTCCACCCTTCCAGTTCCGATGTTGATGCCTCCGCAAATGTGTTCAACCATGCCAGAATGCTCAGCGACATCAGTGTTGATGGTTGCGCCGATCTTCACAAGTACTTGGATAATGACTCCAAGTGCTTATATGTCAAATCCCATGCTCAGTGCAGGTCAAAAGGGTATATAAATTATCTGCAGATCTTTTACTGCAGCTTTGGGCATTCCTCATTTTTGGGTCATGCCCTGCTTATACTGTGGCTTGTGATATTGTTTTATCTTTTGGGAGATACAGCTTCAAATTACTTTTGTAGTAACCTGGAAGGTCTGTCTAATATCTTGAGACTATCCCCTACCATAGCTGGGGTAACCTTGCTTTCTCTCGGAAATGGTGCACCTGATTTTTTTGCCAGTGTTGTTTCTTTCACAAGATCCAATGACGGTGCAGTTGGCCTGAATAGCATTCTGGGAGGGGCGTTTTTTGTGTCCAGTGCTGTTTTGGGGATCATAAGTTTTCTTGTTGGTGCAAATGAAACTGCAATTGACAAGGCTAGTTTCATCAGAGATGTCATTTTCTTCCTTTTCGCACTTTTCATTCTCCTTGTCATCATTTCTATCGGTAAAATCAGCTTGTTGGGTTCAATTTTTTATGTTTCCATTTACTTCCTGTATGTGTGTGCTGTGTCTGCAACACATTTCATCTATGGAGGGGACAGGACAGAAAGGGAACTTGGCTCATCTTCTGATGACTTGACTGAGTCAGGCGTACCATTGCTAGGCTGTGTTGATGATGAGAAACCAAATGGATCAAACAAAGAGGTAATGGAAGATCAAGGGGAGAAGCATCATCAGGATTTTGGTAATAATTCTTTTGACTTTACTTACTTGAGCAAGTTTCTACATGTACTAGAGCTACCTCTTTGCTTGCCAAGAAGGCTTACTATACCAGTTGTGAGTGAGGAAGGTTGGTCAAAGCCATATGCTGTTATATCTGTCACATTGGCACCAGTGTTATTTTCAGCTCTTTGTAACACCCAAATGGAAAATGAGAGTTCAAGGAGTAGTCTTGTTTCATACTTGACAGCTGCTTTGATTGGCATTGTTTTGGGTAACATGGCATGTGTGACAACCAAGAGCACTAGTCCACCCAGAAAATGCTTGTTTCCTTGGCTAGCTGGGGGATTTTCCATGAGTGTAACATGGACTTATATCATTGCTGAGGAACTTGTTTCCCTCTTGGTTGCACTTGGGAATGTGATAGGAGTTAGTCCTTCAATCCTTGGACTAACTGTCCTAGCTTGGGGTAATTCTCTAGGAGATTTGATAGCCAATGGTGCAATGGCCAAGAATGGAGGAGCTGATGGGGCCCAAATAGCTGTCTCTGGTTGTTATGCAGGCCCTATGTTTAACATTTTGATGGGCTTGGGCTTACCTCTTCTACTCTCAGCATGGTCTGAATACCCAGAGTCTTATGTGATTCCCAAGGACCCTTCTCTTTTTGCAACACTTTTGTTCTTGATGGGAGGGGTGCTTTGGGCCCTTGTGATATTGACAAAGAAGAATATGAAGCTTGATAAGTCATTGGGAATTGGGCTCTTGACCATTTACCTCTGCTTTTTGTTTATAAGGATGGTCATTGCAATTGGTGTTATTAAATTCTAG 1743 0.4234 MARSIYNTKPLHRKLLLLNISFIFLVCLFLNAYLHPSSSDVDASANVFNHARMLSDISVDGCADLHKYLDNDSKCLYVKSHAQCRSKGYINYLQIFYCSFGHSSFLGHALLILWLVILFYLLGDTASNYFCSNLEGLSNILRLSPTIAGVTLLSLGNGAPDFFASVVSFTRSNDGAVGLNSILGGAFFVSSAVLGIISFLVGANETAIDKASFIRDVIFFLFALFILLVIISIGKISLLGSIFYVSIYFLYVCAVSATHFIYGGDRTERELGSSSDDLTESGVPLLGCVDDEKPNGSNKEVMEDQGEKHHQDFGNNSFDFTYLSKFLHVLELPLCLPRRLTIPVVSEEGWSKPYAVISVTLAPVLFSALCNTQMENESSRSSLVSYLTAALIGIVLGNMACVTTKSTSPPRKCLFPWLAGGFSMSVTWTYIIAEELVSLLVALGNVIGVSPSILGLTVLAWGNSLGDLIANGAMAKNGGADGAQIAVSGCYAGPMFNILMGLGLPLLLSAWSEYPESYVIPKDPSLFATLLFLMGGVLWALVILTKKNMKLDKSLGIGLLTIYLCFLFIRMVIAIGVIKF 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00508 580 Gene3D - 355 573 IPR044880 -
Vian8g00508 580 Gene3D - 143 274 IPR044880 -
Vian8g00508 580 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 19 579 - -
Vian8g00508 580 Pfam Sodium/calcium exchanger protein 418 571 IPR004837 GO:0016020|GO:0055085
Vian8g00508 580 Pfam Sodium/calcium exchanger protein 113 254 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00508 Vian-Chr8 8598625 8600367 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00508 55 578 Antiporters AT5G17860 52.830 5.03e-179 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00508 K13754 - gmx:100818583 951.429