Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00502 ATGCTACCACCTGATCAGTTCCAACAGGGTATTTTTCCCATCATAGGATCAAGTTCTGCTGTAGCACTTGGAAATCCACTGAACCAAGTGATTGGTGGAAGTTCAAGTCATGATCCAAATCTTGCTTTGCATATGATGGATGGTGGCCATAACTTATTTGCAAATGAAGGCATAGGAAAAACCCTTATGGCTAAGGTTGCTGCTACGGCAATGGATGAGCTAGTTAGGCCTCTTCGGATTAATGAGCCCTTTTGGATTAAGTCTTCATCTCAAGATGGCAAGCTCTGTCTACTGCTTGAAAACTATCAAAAAATGTTCCCAAGGACCAAACATTTCAAAGGGCCTCGTGAATTTCAATTCCTTCGTTTCTGTCAACAAATTGAAGAAGGCCTGGTGATAGCAGATGTATCATTTGATTCCTTCCAGCAAAAACCCTCTATTTTTCAGTCTTGGAGACATCCCTCTGGATGCTTGATCCAGGAACTGCCTAATGGGTGCTCCATGGTGATACACAGTAATGGTAGGAAGCATGCAGCTCCTAACAAGTGTCAGTTAGGGCTTGCTCACGATGTTGATGGAGGCGTGATTCAGGTGATGAACATGGTGGCTGAAAGCATGAAGACGTTGTGGTGGTTCTAG 639 0.4382 MLPPDQFQQGIFPIIGSSSAVALGNPLNQVIGGSSSHDPNLALHMMDGGHNLFANEGIGKTLMAKVAATAMDELVRPLRINEPFWIKSSSQDGKLCLLLENYQKMFPRTKHFKGPREFQFLRFCQQIEEGLVIADVSFDSFQQKPSIFQSWRHPSGCLIQELPNGCSMVIHSNGRKHAAPNKCQLGLAHDVDGGVIQVMNMVAESMKTLWWF 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00502 212 Pfam START domain 114 170 IPR002913 GO:0008289
Vian8g00502 212 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 116 172 IPR042160 -
Vian8g00502 212 SUPERFAMILY Bet v1-like 63 171 - -
Vian8g00502 212 Gene3D - 95 209 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00502 Vian-Chr8 8441912 8449187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00502 90 169 Homeobox Transcription Factor Family AT1G73360 44.444 6.94e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00502 K09338 - gmx:100795753 126.716