Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00463 ATGCTATTTGCAGTAGCCACCTTGCTTCAGGGCTCCATGGCACAGACCAGACACGTGGTGGGTGATTTCGCCGGCTGGACCATCCCTCCCAGGGGTGCTGCAACCTACATCGCTTGGGTTTCTGGAAAAACCTTCGTCGTAGGGGATACTCTCATGTTTAACTTTACCAACGGCCATCACGACGTAGCCAAGGTGACGAAATCAGTTTATGACACATGCAACGGTGGGAATACCCTTTTCACCATTGCCTCCAGTCCAGCGATCGTGGCACTAAACGAGACAGGGGAACAATATTACATTTGCACCTTTGGATCACATTGTTCCCTTGGTCAGAAATTGACAATTAACGTTGTTAGTAGAGCTTCTGCCATTCCTTCTTCTGCCCCTCAACCTAGTACGAGTGGTTCTTCACCAACACCAAGCACTATGTTATCCCCAGCTCCAGGCCCATCCACTGGACCAGTTACTTTCACTGTTGGAGAGAGCTTAGGCTGGACTGTTCCCACTAACGGTGCTGCAGCTTACACATCTTGGGCATCTGGCAAGACTTTCAAGGCTGGAGACATACTAGTGTTCAACTACCGATCCAATACTCACAACGTAGAGGAAGTGAGAAAAGAGAATTTTGACTTTTGCAACTCAACCTCTCCTCTTGCCACTTACACCACAACACCTGTGAGAGTGACCTTGAACAGATCTGGTGCTCACTTCTTCATCTGTGGAGTTCTAGGGCACTGTCAAGGAGGTCAAAAACTCGCCATCAATGTCACCGACAACAATAGTAGTGCCACCTCGTCTTCCCCTGTCGCTACCCCTCCTCCAGCCGCCACCGCTCCTCCCCCCTCTTCTCCCTCAAGCTCTCTCATCCCTCTCCCACAGAACTCTGAAGCTGCATCTGTCGGACTTGTTGGAGGTTCTGCCACCCTTCTTTCACTTGTCTTGGCTTTCTTCTGTTAG 957 0.5026 MLFAVATLLQGSMAQTRHVVGDFAGWTIPPRGAATYIAWVSGKTFVVGDTLMFNFTNGHHDVAKVTKSVYDTCNGGNTLFTIASSPAIVALNETGEQYYICTFGSHCSLGQKLTINVVSRASAIPSSAPQPSTSGSSPTPSTMLSPAPGPSTGPVTFTVGESLGWTVPTNGAAAYTSWASGKTFKAGDILVFNYRSNTHNVEEVRKENFDFCNSTSPLATYTTTPVRVTLNRSGAHFFICGVLGHCQGGQKLAINVTDNNSSATSSSPVATPPPAATAPPPSSPSSSLIPLPQNSEAASVGLVGGSATLLSLVLAFFC 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00463 318 ProSiteProfiles Phytocyanin domain profile. 16 119 IPR003245 GO:0009055
Vian8g00463 318 MobiDBLite consensus disorder prediction 272 287 - -
Vian8g00463 318 CDD Phytocyanin 155 256 - -
Vian8g00463 318 SUPERFAMILY Cupredoxins 16 118 IPR008972 -
Vian8g00463 318 FunFam Blue copper 154 262 - -
Vian8g00463 318 SUPERFAMILY Cupredoxins 155 257 IPR008972 -
Vian8g00463 318 ProSiteProfiles Phytocyanin domain profile. 155 258 IPR003245 GO:0009055
Vian8g00463 318 Pfam Plastocyanin-like domain 26 111 IPR003245 GO:0009055
Vian8g00463 318 Pfam Plastocyanin-like domain 165 250 IPR003245 GO:0009055
Vian8g00463 318 MobiDBLite consensus disorder prediction 258 290 - -
Vian8g00463 318 PANTHER BLUE COPPER PROTEIN 156 264 IPR039391 GO:0009055
Vian8g00463 318 FunFam Cupredoxin superfamily protein 15 123 - -
Vian8g00463 318 MobiDBLite consensus disorder prediction 124 151 - -
Vian8g00463 318 ProSitePatterns Type-1 copper (blue) proteins signature. 95 111 IPR028871 -
Vian8g00463 318 Gene3D - 16 129 IPR008972 -
Vian8g00463 318 Gene3D - 155 270 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00463 Vian-Chr8 7775169 7776367 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00463 160 316 Phytocyanin Superfamily AT2G25060 38.994 1.26e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00463 - - gmx:100805802 354.369