Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00461 ATGACTATCGTGAACCTAGAACCCAGAGCAAAGAAGACAAAATCAAGGAAGAACAAAGCAGTGGCTGATGAGAAGGCACCTTTGATACCTAAAACTCTTGAGGCTGATTCTTCAGGGTTTGATGATTTCAATGGTGCTTCATTTTCTGGGGCAGTTTTCAACTTGTCCACCACAATTATTGGTGCTGGGATCATGGGGTTGCCCGCATGTGTTAAAAAATTGGGGATGATACCTGGTCTTCTTTCTATAATCTTGATTGCTTTTTTGACAGAGAAGTCAATTGGGTTCATGATTAGGATTTCCCGGGCAGGGAATCTTTCTTCTTATGCCACTCTAGTGGGGGATACATTTGGCAAATTTGGAAAAGCCCTGGTGCAGATATGTGTCGTAGTCAACAACATTGGAATGCTGATCATTTACATGATTATTATCGGTGATGTGATTTCTGGAACATCTTCTGGTGGAGTTCATCATTCTGGTTTACTTGAAGGATGGTTTGGAGTTTACTGGTGGACAGGACGTACATTTGTTCTTCTTGTTATAACACTTTCTGTGTTTGCACCTTTGTCCTGCTTCAAGCGCATTGATTCGTTGAGATACACTTCTGCATTATCATTTGGTTTAGCAGTTGTCTTTCTCGTCATTGCTGTGGGAATTTCAATTTTCAAGATTGTCATTGGAGGCATTGAGATGCCTAGATTATTCCCTATCATTACTGATGTTTCCTCAGTTTTTGAACTGTTTACAGTAACTCCTGTGGTTGTCACAGCCTACCTATGCCACTTCAATGTACACCCCATAGACAACGAACTCGAGGACTCATCACAGATTCGTGGGGTTGTGCGTGCTTCCCTTGCTCTATGTGCTTCAGTGTACTTATTGACAAGCTTCTTTGGGTTCCTTCTATTTGGTGAAGGAACTCTGGATGATGTGCTTGCAAATTTTGACACTGATCTTGGGATTCCTTTTGGTTCTGTGCTCAACGATGCTGTTCGTGCTACCTATGCCGCACATCTTATGCTTGTGTTTCCAGTTGTCTTCTATGCAGTGCGGATCAACCTTGATGGTCTTTTGTTTCCATCATCTAGACCTTTGGTTCTAGATAACATCAGATTTTCAATGATTACTGTGGCCCTTATTGTTTTTTCCTTTTGGGGAGCAAATTTCATACCCAGCATTTGGGATATTTTCCAGTTCACTGGAGCAACTGCTGCAGCATGTTTAGCATTCATATTTCCAGCTGCCATCATCCTTAAGGATCGGTACAACATTGCAACTAATAGGGACAAGATTCTGTCTGTCTTCATGATAGTCCTCGCAGTCTTTGCAAACGTTGTGGCTATATACAGTGATGCACTTGCCTTGATCAAGACTAGTCTTAGCTCAATGGGAGTGATTTCATGA 1404 0.4181 MTIVNLEPRAKKTKSRKNKAVADEKAPLIPKTLEADSSGFDDFNGASFSGAVFNLSTTIIGAGIMGLPACVKKLGMIPGLLSIILIAFLTEKSIGFMIRISRAGNLSSYATLVGDTFGKFGKALVQICVVVNNIGMLIIYMIIIGDVISGTSSGGVHHSGLLEGWFGVYWWTGRTFVLLVITLSVFAPLSCFKRIDSLRYTSALSFGLAVVFLVIAVGISIFKIVIGGIEMPRLFPIITDVSSVFELFTVTPVVVTAYLCHFNVHPIDNELEDSSQIRGVVRASLALCASVYLLTSFFGFLLFGEGTLDDVLANFDTDLGIPFGSVLNDAVRATYAAHLMLVFPVVFYAVRINLDGLLFPSSRPLVLDNIRFSMITVALIVFSFWGANFIPSIWDIFQFTGATAAACLAFIFPAAIILKDRYNIATNRDKILSVFMIVLAVFANVVAIYSDALALIKTSLSSMGVIS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00461 467 Pfam Transmembrane amino acid transporter protein 46 449 IPR013057 -
Vian8g00461 467 PANTHER AMINO ACID TRANSPORTER 44 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00461 Vian-Chr8 7747972 7751259 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00461 1 459 Amino Acid or Auxin Permease AAAP Family AT3G30390 63.043 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00461 K14207 - gmx:100785277 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g00461 8 7747972 7751259 Vian2g00239 2 2488896 2491467 PCT