Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00460 ATGAGGAATGCAAGTGTTGCAGCTGAAGCAGTGGAGCAAAACTCTAGAAGGAACAAGGGAGTTGTTGATGAGAATGTTCCCTTGTTAGCAAAGGTTCAGAGGAGTGATGATGTTTCAGGGTTTGAAGAGTTTAATGGAGCTTCATTTTCTGGGGCAGTTTTCAACTTGTCAACCACAATTATTGGTGCTGGAATCATGGGGTTGCCAGCATGTGTGAAAAAGTTGGGGATGGTGCCTGGGCTTCTTGCTATAATCTTAACAGGTTTCTTGACAGAGAAGTCAATTGAGTTCCTGATTAGGAGTTCTAGGGCAGGGAATCTTCCCTCTTATGGGAGTCTCATGAGGGATGCTTTTGGAAAATTTGGAAAAGCTTTGGTGGAGATATTTGTAATAGTCAACAACATTGGGGATGTGATTTCTGGAACATCTTCTGTTGGAACTCACCATTCTGGTCTCCTTGAAGGCTGGTTTGGAGTTCATTGGTGGACTGGAAGAACGTTTGTTGTTGCGTTTACAACAGTTGCTGTGTTTGCACCTTTGGTCAGTTTTAAGAGGATTGTACACCCCATAGACAATGAACTGGAGGACTCCTCTCAGATGCATGGCGTTGTACGTACATCCCTTGCTCTGAGTGCTTCAGTGTACTTGCTGACAAGCTTCTTTGGGTTCCTCCTATTTGGTGAAGCAACACTTGATGATGTGCTTGCAAATTTTGACACTGATCTTGGAATTCCTTTGGGTTCTGTGCTCAATGATGCAGTTCGTTTCAGCTATGCTGCACATCTCGTGCTTGTATTTCCAGTTGTCTTCTATGGAATGCGTGTCAACCTAGATTCTCTTTTATTTCCATCATCCAGGCCTTTGACTCAAGATAACATTAGATTTGCTTCAATTACTGTTACACTTGTTGCTGTTATCTTCCTTGGAGCAAATTTCATACCCAGCATTTGGGATATTTTCCAGTTTACTGGAGCAACAGCTGCTGTTTGCATAGCATTCATATTTCCAGCTGCCATCATTCTACGGGATGGACACAGCATAGCAACTAAAAGGGACAAGATTCTATCAGTCTTTATGATATTCTTGGCTGTCTTGTCAAATGCTGTGGCTTTATACAGTGATACTTATGCCTTGATCAAGAAGAACAAAACTTATACATGA 1161 0.4212 MRNASVAAEAVEQNSRRNKGVVDENVPLLAKVQRSDDVSGFEEFNGASFSGAVFNLSTTIIGAGIMGLPACVKKLGMVPGLLAIILTGFLTEKSIEFLIRSSRAGNLPSYGSLMRDAFGKFGKALVEIFVIVNNIGDVISGTSSVGTHHSGLLEGWFGVHWWTGRTFVVAFTTVAVFAPLVSFKRIVHPIDNELEDSSQMHGVVRTSLALSASVYLLTSFFGFLLFGEATLDDVLANFDTDLGIPLGSVLNDAVRFSYAAHLVLVFPVVFYGMRVNLDSLLFPSSRPLTQDNIRFASITVTLVAVIFLGANFIPSIWDIFQFTGATAAVCIAFIFPAAIILRDGHSIATKRDKILSVFMIFLAVLSNAVALYSDTYALIKKNKTYT 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00460 386 PANTHER AMINO ACID TRANSPORTER 187 366 - -
Vian8g00460 386 Pfam Transmembrane amino acid transporter protein 186 370 IPR013057 -
Vian8g00460 386 Pfam Transmembrane amino acid transporter protein 47 182 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00460 Vian-Chr8 7726217 7736240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00460 171 385 Amino Acid or Auxin Permease AAAP Family AT5G38820 67.281 8.04e-96 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00460 K14207 - mtr:25495473 568.54