Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00428 ATGTTTGTTCAGGCTTTGAAGAGGAGTTTGAGCTATATCGATGGCAACAAAATTGAGGACTCCGACAGCCTGGAGAGGATTAAGCGAGCGTTGGCCGAGGCGATCGGCGGGGACGGCGACGGAATGGTCTCGGTGACGAGACCGGCAATGGCGAACTCGGGGGTTGTGGTAAGGAGGTCTGGGCTGGTGGATGGCGTTGGCGAGCGTCGCGCGAAAGCGGAGAGAATGTTTACCTTAATGGATGGGTTTCTGAAGAAAGACCCTCTCAGTCTCCAAAAGGATATTCTGAATCATGTGGAGTACACTGTGGCCAGGTCACGGTTTAATTTTGACGATTTCGAAGCGTATCAGGTTTCATTTAATTTGCTTGAGAAGTACTTGGAAGCACACTCAAAGGCCTCCATGTGGGAAAATGAGCTCCTGGATGTAGGCTACCAGCCTTTGTGCATCCAAATTCCCTACACAGTTGTGGTGACTTTTCATGTTGATGATGATGTAGTGGGAAATATGGATTTTGGATTCCTTCAAGCTTATGATCCACTTGATCCAAATGGAAATATCACAATCAAATGGGATATTATAAGTTGGACACCTGATGGTTATGTAGTAATTATGTCTAAGAAGCAATTGAATGGACAGGCTGTTGTTACAATGAACAATTTCCAAAAATACCGTCATATCTCAGCACCTGGGTGGTCACTAGGATGGACATGGGCAAAGAAGGAGGTGATATGGAGCATGGTGGGAGGTCAGACCAATGAACAAGGGGATTGCTCAAGATTTAAGGGAAACATCCCACATTGCTGTAAAAAGAACCCCATAGTTGTAGATTTACTTCCCGGAACACCTTACAATCAACAAATTGCAAACTGCTGCAAAGGTGGTGTACTCAGCTCATGGGCACAGGATCCATCCAAAGCAGTTGCAGCCTTTCAAATCAGTGTAGGTAGTGCTGGTACCACCAACAAAACTGTCAAACTGCCACAAAGCTTCACCTTGAAAGCACCAGGCCCCGGTTACACATGTAGCCCGGCGAAAATTGTGAAACCAACTCAATTCATACAACCAGACAAAAGAAGAGTGACCCAAGCTCTCATGACATGGAACGTGACATGCACATATTCACAATTTCTTGCTCAGAGAACACCCACTTGCTGCGTCTCGCTCTCGTCTTTCTATAACAATACTGTTGTTCCCTGCTCTACATGTGCATGTGGCTGCCAGGGCAACTCATCACTAACAGGGGACTGTGTAAATCCAGATTCACCACATCTAGCATCAGTTGTTTCCAACCCTGGACCTGATAAAAGTAGTATTGCACCTTTGGTTCGATGTACTCGTCATATGTGTCCTGTCCGAGTTCACTGGCATGTTAAGCTTAACTACAAGGAGTACTGGCGCGTGAAGGTCACTGTTACTAATTTCAATTACAGGATGAACTATTCTGACTGGAACTTGGTTGTTCAACATCCAAACTTTGACAATCTGACCCAGCTTTTCAGTTTCAACTACCAGTCAATAACTCCATACGGATCAATAAATGATACCGCAATGTTGTGGGGAGTTAAGTTCTACAATGATTTTCTCATGCAAGCTGGTTCTGATGGTAATGTACAGTCTGAACTACTATTCAAAAAGGATAAATCAACTTTCACTTTTGACAAGGGTTGGGCCTTCCCTCGGAGAGTCTATTTCAATGGTGACGTTTGTGTGATGCCACCACCTGATGCCTATCCATGGTTACCTAATGCTGGTTCCAGGCAAGAGGTTTCCCTGCTTGTTTTGATGATGACCTCTTTGGTGGCCTTAGTATTGCATGCATACGCTTAA 1830 0.4503 MFVQALKRSLSYIDGNKIEDSDSLERIKRALAEAIGGDGDGMVSVTRPAMANSGVVVRRSGLVDGVGERRAKAERMFTLMDGFLKKDPLSLQKDILNHVEYTVARSRFNFDDFEAYQVSFNLLEKYLEAHSKASMWENELLDVGYQPLCIQIPYTVVVTFHVDDDVVGNMDFGFLQAYDPLDPNGNITIKWDIISWTPDGYVVIMSKKQLNGQAVVTMNNFQKYRHISAPGWSLGWTWAKKEVIWSMVGGQTNEQGDCSRFKGNIPHCCKKNPIVVDLLPGTPYNQQIANCCKGGVLSSWAQDPSKAVAAFQISVGSAGTTNKTVKLPQSFTLKAPGPGYTCSPAKIVKPTQFIQPDKRRVTQALMTWNVTCTYSQFLAQRTPTCCVSLSSFYNNTVVPCSTCACGCQGNSSLTGDCVNPDSPHLASVVSNPGPDKSSIAPLVRCTRHMCPVRVHWHVKLNYKEYWRVKVTVTNFNYRMNYSDWNLVVQHPNFDNLTQLFSFNYQSITPYGSINDTAMLWGVKFYNDFLMQAGSDGNVQSELLFKKDKSTFTFDKGWAFPRRVYFNGDVCVMPPPDAYPWLPNAGSRQEVSLLVLMMTSLVALVLHAYA 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00428 609 Pfam COBRA-like protein 214 375 IPR006918 GO:0010215|GO:0016020
Vian8g00428 609 PANTHER PROTEIN COBRA 174 599 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00428 Vian-Chr8 7243857 7254317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00428 176 607 COBRA Gene Family AT3G02210 73.380 0.0 691
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00281 2 2954035 2957151 Vian8g00428 8 7243857 7254317 PCT