Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00427 ATGGCCTCTTCCGATATTGATTGGGACAGGCTAGATAAAAAGAAGTTCTATGTCGTGGGAGCAGGACTCTTTACAGGTGTTACAGTAGCACTCTACCCGGTTTCTGTTGTGAAAACTAGGCTGCAGGTTGCTTCAAAGGATACTCTGGAGAGAAGTGCATTATCTGTTGTGAAAGGATTACTTAAAACGGATGGCATCCGTGGTTTGTATAAAGGGTTTTTTACAGTTATGACTGGTACAATTCCTACCAGAATCATATTTCTTACTGCCTTGGAGACCACAAAGGTGGCTTCCCTCAGGATGCTGGAGCCATTTAGACTATCTGATACCACCCAGGCTGCCATATCAAATGGAGTAGCAGGCATGACATCATCACTTTTGGCACAAGCTATGTTTGTTCCAATTGATGTGGTTAGCCAAAAGTTGATGGTGCAAGGATACTCTGGCCATACGCAATATAGGGGGGGTTTGGATGTTGCTCGTAAGGTGTTAAGGTCTGATGGCATTAGGGGATTATATAGAGGATTTGGTCTATCTGTCGTGACATATGTACCATCTAGTGCTGTGTGGTGGGCAAGTTATGGCTCAAGTAAACATTACTTATGGAGAATCTTGGGGGATAACTCCGGTGAGGAAGGCACTCCTAGTCTACTAAAGATTATGTTAGTTCAGGCTACTGGAGGGATCATTGCTGGTGCTACTGCATCCTGTATTACAACCCCGTTGGATACAATCAAGACACGGTTACAGGTGACTGGACTTGAAAAGAAAATCTCTGTAAAACAAGTTGTTAAAGATTTGATTCTTGAAGATGGTTGGAAAGGTTTATATAGAGGATTAGGTCCAAGGTTTTTCAGCATGTCAGCGTGGGGCACTTCAATGATTCTGGCTTATGAATATCTGAAGCGCGTGTGTGCAAAGGATGAAGATGTGTAA 936 0.4316 MASSDIDWDRLDKKKFYVVGAGLFTGVTVALYPVSVVKTRLQVASKDTLERSALSVVKGLLKTDGIRGLYKGFFTVMTGTIPTRIIFLTALETTKVASLRMLEPFRLSDTTQAAISNGVAGMTSSLLAQAMFVPIDVVSQKLMVQGYSGHTQYRGGLDVARKVLRSDGIRGLYRGFGLSVVTYVPSSAVWWASYGSSKHYLWRILGDNSGEEGTPSLLKIMLVQATGGIIAGATASCITTPLDTIKTRLQVTGLEKKISVKQVVKDLILEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLKRVCAKDEDV 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00427 311 SUPERFAMILY Mitochondrial carrier 9 301 IPR023395 -
Vian8g00427 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 200 IPR018108 -
Vian8g00427 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 97 IPR018108 -
Vian8g00427 311 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 3 309 - -
Vian8g00427 311 PRINTS Mitochondrial carrier protein signature 173 191 IPR002067 GO:0055085
Vian8g00427 311 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Vian8g00427 311 PRINTS Mitochondrial carrier protein signature 228 250 IPR002067 GO:0055085
Vian8g00427 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 219 304 IPR018108 -
Vian8g00427 311 Pfam Mitochondrial carrier protein 224 308 IPR018108 -
Vian8g00427 311 Pfam Mitochondrial carrier protein 21 96 IPR018108 -
Vian8g00427 311 Pfam Mitochondrial carrier protein 115 202 IPR018108 -
Vian8g00427 311 Gene3D Mitochondrial carrier domain 17 310 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00427 Vian-Chr8 7232835 7237166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00427 6 309 Chloroplast and Mitochondria Gene Families AT5G15640 71.661 1.06e-159 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00427 K15121 - gmx:100819519 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g00427 8 7232835 7237166 Vian2g00282 2 2959999 2964461 PCT