Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00425 ATGACTGAAGCATCATCACCAGAACCTCTCAAAGTTATCCAAGTTTGTTCGGTGGCACCGTTTCAGGAACCAACCCTTTCCACCCTTGTTCCAACCTCTCTTCCACTAACCTTCTTCGACCTCTTATGGCTTCGATTTCCACCTGTTCAACGTCTCTTCTTCTATCACTTCCCACACACAACCTCTTCTTTCCTTCATTCTCTTCTTCCCTCTCTCAAACTTTCTCTTTCCCTCACTCTCCAACACTTCCTCCCTTTCTCTGGCACTCTCACATGGCCCTCTCACTCTCCCAAACCCATCATCAACTATCTCCCCGGCGACACTGTTTCCTTCACTGTTGCTGAGTCCGACCTAAACTTCAACCATCTTTGCTCCCATCTCTGTGAAGCATCACAACGCAACGATTTAGCACCCCACTTGGCCAATTCCCATGATAAAGCATCTCTGTTGGCGGTTCAAGTCACTCTGTTCCCAAACGCTGGCTTTTGCATTGGAGTAACCACACACCATGCAGCTTTCGACGGAAAATCTTCATCCATGTTCATCAAAGCATGGGCCTATATATGCTCTAACCTTCAAAACCCTACTAAACCCACACCAACACCAACACCATCCTTACCTCACTATCTTTCGCCTATCTTTGACAGATCATTGATTAAATACCCTTCTGGATTGGCTGAACTGTACGAAGACCAGTGGATGAATCGTAATGATTCGAATAACCGAAGTCTCAAGGTGTGGGAGTCTCTCACTGCAACACCGAGAGATGGACTCAAAGGTTTGTTTGAATTGACCCCTTCACAGATTCAAAAGCTCAAACAATACGGAAACTCTAAGGTGAAAGGGGCTGTTCATCTCTCAACATTTTCTGTTACGTGTGCGTATGTGTTAGCGTGTTTGGTCAAAGCGAACCGAGTGAAGGAAGAAAATGTGCTGTTCATATTTACTGTTGACTGTAGAGCGCGCTTGGATCCTCCAATTCCAGTCACGTATTTTGGAAACTGCGTTAAAGGAGAATTCGTTGTGGCTTTGACTAAGGAGTTGATTGGAAAAGATGGGTTCATTTGTGCTTTGGAGGGGATAGTTGAGGCTTTGAATAGGGTGAAGAAAGAGGGAGTTTTGAATGGAGAAGAAAAATGGGTTTGGATTATGAATGACCTTGGGGAGGGTAGAATGATTTCTATAGGTGGGTCTCCGTTGTTTGAGGTTTATAGCATTGATTTTGGTTGGGGAAGGCCAAAGAAGGTGGATATGTTATCCACAGACAAAACAGGAGCATTTTCTCTCAGTGAAAGTAGGGATATCAGTGGAGGAATTGAGATTGGATTGGTGTTAAGTAAAAGTGAGATGGAAGATTTTACTTCCCTTTTTCTTCAAGGACTTGATTCCCTTTAG 1395 0.4423 MTEASSPEPLKVIQVCSVAPFQEPTLSTLVPTSLPLTFFDLLWLRFPPVQRLFFYHFPHTTSSFLHSLLPSLKLSLSLTLQHFLPFSGTLTWPSHSPKPIINYLPGDTVSFTVAESDLNFNHLCSHLCEASQRNDLAPHLANSHDKASLLAVQVTLFPNAGFCIGVTTHHAAFDGKSSSMFIKAWAYICSNLQNPTKPTPTPTPSLPHYLSPIFDRSLIKYPSGLAELYEDQWMNRNDSNNRSLKVWESLTATPRDGLKGLFELTPSQIQKLKQYGNSKVKGAVHLSTFSVTCAYVLACLVKANRVKEENVLFIFTVDCRARLDPPIPVTYFGNCVKGEFVVALTKELIGKDGFICALEGIVEALNRVKKEGVLNGEEKWVWIMNDLGEGRMISIGGSPLFEVYSIDFGWGRPKKVDMLSTDKTGAFSLSESRDISGGIEIGLVLSKSEMEDFTSLFLQGLDSL 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00425 464 SUPERFAMILY CoA-dependent acyltransferases 251 461 - -
Vian8g00425 464 Pfam Transferase family 33 455 - -
Vian8g00425 464 PANTHER - 10 463 - -
Vian8g00425 464 Gene3D - 254 464 IPR023213 -
Vian8g00425 464 Gene3D - 10 246 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00425 Vian-Chr8 7222834 7224228 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00425 52 459 Monolignol Biosynthesis Gene Families AT5G48930 24.113 4.17e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00425 - - gmx:100800849 597.43