Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00416 ATGGCTCCTTTTTGCTCTCTTCCATTTTTCACCACCACAAAATCCAAAACCACGAGCGAATGTAATCCAATAGAACAGCTCTGTCACCGCTTCTCTCTTGCTGAGCTTCAAGCAGCCACAAATGGGTTCATGCCGAGTTTAATTGTCAATGGAGAAGGTCAATGTCAGGTCTACAAAGCCCACCTCAAAGGCCATGGAGACGTAGCCATCAAGCACTTCAAGACTAGAAGCCCAGATCGTGATATAGAATTCAGGGTCGAAGTCAAGATTCTGTGTCAACTACACCACCCAAATGTTGTTCCTTTGGTTGGTTTCTGTGATCACAAACATGACAAGTTTGTTGTGTATGATTATGTCTCCAATGGAAGCCTCCATGATTGTTTGCATGGCACCAACAATAACAGTGTTGTTCCCTTGTCATGGATACAAAGACTTAACATCTGCATCGGGGTGGCTCGTGGACTGCACTACATTTACTTCGAAACCAAGATACCCATCATACACCGTGCTGTGAAATCAAGCAACGTTCTTTTGGACCATAATTTGGTGCCTAAAGTGGCAGATTTTGGACTTTGCAAGAAGCACCCACAAGAGGAGTCAAGGCCAAAGCCACCAAGAGTTGAGTTGAGGGAGAACTTGGAGGTTAGTTTGGAATACATGGAGCCGGAGTATTTTATGACTGGAAGGTTATCAAACAAATCAGATGTGTACTCTTTTGGGGTGGTAATGTTAGAGATTTTGTGTAGGAAGAAAGCTTGTTTTTTAACCCCAGGTGGAGAATGTGAGTACCTTGCTAAGTGGGCCTTTGATGATGAAAGGAAGGGGGTTCTTGAGAAGATTGTTGACCCATCTCTCATTGGAAAAATAGCACCTGCTTGTTGGAAAGTGTTCATTGAGATTGTTCAGAGATGTTTGGCATCAGTTGAAGAGAGGCCAACGATGGGTGAAGTGGTAGTGATTCTTGAAAATGCATTTTTGTTGCAAGAGAGAGCAGATGTGTGA 1002 0.4351 MAPFCSLPFFTTTKSKTTSECNPIEQLCHRFSLAELQAATNGFMPSLIVNGEGQCQVYKAHLKGHGDVAIKHFKTRSPDRDIEFRVEVKILCQLHHPNVVPLVGFCDHKHDKFVVYDYVSNGSLHDCLHGTNNNSVVPLSWIQRLNICIGVARGLHYIYFETKIPIIHRAVKSSNVLLDHNLVPKVADFGLCKKHPQEESRPKPPRVELRENLEVSLEYMEPEYFMTGRLSNKSDVYSFGVVMLEILCRKKACFLTPGGECEYLAKWAFDDERKGVLEKIVDPSLIGKIAPACWKVFIEIVQRCLASVEERPTMGEVVVILENAFLLQERADV 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00416 333 PANTHER OS07G0166700 PROTEIN 27 328 IPR045272 GO:0004714|GO:0006468
Vian8g00416 333 Pfam Protein tyrosine and serine/threonine kinase 55 319 IPR001245 GO:0004672|GO:0006468
Vian8g00416 333 Gene3D Transferase(Phosphotransferase) domain 1 119 331 - -
Vian8g00416 333 SUPERFAMILY Protein kinase-like (PK-like) 16 319 IPR011009 -
Vian8g00416 333 Gene3D Phosphorylase Kinase; domain 1 7 118 - -
Vian8g00416 333 ProSiteProfiles Protein kinase domain profile. 43 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00416 Vian-Chr8 7014541 7015542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00416 10 329 Receptor kinase-like Gene Family AT4G39110 43.344 1.35e-73 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vian8g00416 PK_Tyr_Ser-Thr 5.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00416 - - var:108344519 685.256