Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00396 ATGGGAAAGAATGTGAAGGTTGCAGGAGAGAATCAGCAATTCTCCACAGAATCATCAGGAACTTCAATGTCTTCATCTTCTCGTTCATCTAGCATGTCATCCCTGGAGTTCAGCAGAGCAATTCAGATAGAACCACCGTCAATAATCAGTCCAATGAAAATTCCAGAGAATTCTAATCCAGAAATAGAAGTGAAGCAACATGGCAACAAAGGCCCTCACTCCCTTGATTTCTATGACATTGTGAAAGATTCAATGCATAGAGATGTTCAAGGATTGTCTGTAAAAATTGTGGCTAAAGGGGAAAAGAAAGGTAGAATCTTGAAACACGTTGATTCTCCCAGGCCTTTGGAGCCCCCAAAACCTGTAAATATGGTTGCTTGGGATTCACCGAGACTCTCTTATGACGGGAGGGACACACAAGATTCATTAAAGTCTGCTAGAAAACCTAAGGAACTCCCAAGGCTTTCCTTGGACAGCAGAGAAGGATCCATCAAAAGCTTCAATGAAGGAACAAAATGTCGTGGCCTTCTGAAGGGTCTACAGAAAGGGTATGGTAGCTCTGGCACAATGTTTAAGCAGCTGCAGGAACCAGAAACTTCTAGAAGATCATCCAGTGTTGTAGCAAGGTTGATGGGACTAGAAACCTTCCCAGGCGGTACAGAAGCATGTGATATTCAACCACGGATATGTTCCAGCAAAAATGAGTCAGATGCAGAATCTTGCACAAATGAGAGTGCATCAATGAAAGGGTCTACCTTTCTTCAGTTTAGGAGGGATGCTTCAATCCTCAATGTGACACCCTATTCACGGTTTTCCCTAGAATCTGAAGCAAGCCAAGGTTCTCAAATACAGGTTTCAAAGAGAAGTGAATCTTCAGCAAAAGCATCAAACCAATCGCTCTCTGTATATGGGGAGATTGAAAAGAGGATAGCAGATATAGAGTTCAAAAACTCTGGAAAGGATCTCAGAGCGCTTAAACAGATTCTTGATGCAATGCAGAGATATAAAGAATCATTTGAGATTACAAGGGACCAGACTTCAAATTCTCTATCTGACCATAGGAGTAATAACAGTCTCAGTGAAAACTCTGTGGTTAAAAGCCCAAGAATACGGCAGAAGGACCCAGCATCCACCCCTTCTGAGATGAGAAATTCAACCCAGGGTAGTAAGTCACCAATTTTCACCATGAAACCAGCAAAAGCTGCAGGAAAAACTGGCAAGTTTGGTTCTGCTAATACTGCAAATGGAATAGTGGGTGAGAAGCTTGACAGGAAAACAGCAAAGGGTATAAGTCCAGCCATCAGACAGGCCAAGGATTCCCTTGGCCAACCCTTCCACTCGGTGGATAAGAGCAACAACAAGATGAGAACATCAAAATTCTTGCAATCCCCAAAAGTTGCTCAAGTAATCAATGGGGAAAACGCCACCAACTCCAACAATACAACAGGGGCCAAGAGCCCAAGGCTACAAAAGAAGTTTGGTTTGGAGAGGCGCTCACCAACAACTATCCCATCATCAGAATCATGCAGTAATAGAAGACAACATAATAGACAATCAGTGGAATTATCTTCCCCAAGTACTACACCCAGACAAAGATTCAATGAGACCAAAAACCAAAGGGAGGATTTTAAGCAAGAAGTTGGCGTAAAAGTCATTCAAACTGATCAAAGTAATGCAGCAAAAGATTTGAGCAAGGAAAGCTTTCAAGTTGAGAAAATAATTACAGCAGAGCAACCAAGCCCCGTGTCTGTTCTTGATGCTGCTTTCTACAATGAAGAACCACCTTCACCGGTCAAAAAGAAATCAGACATCACAAGAGATTTAGATGATACTCTTTATGATAGCAGTGAGGAGAACTCGGAAGATCTCCCGCTTTTATCCAACAATGCAAAAGCCAACTTCAGCAGTAGAACTCAAAATTTGGTTCAAATTCTCCACCAAATTGATTCCAATGATGAGAGATTTACCAATTTCAGAGACTACAATGATCCTGACCATAAATATATATCAGAAATACTGTTAGCATCAGGGCTTCTCAGCAGTCCAAGCTCTAGCTACGATTTTCATTCATCAAGTCACCCTATAAACCCAAAGTTGTTCCTTGCTCTAGAGCAAATCAACACAAACAAGAATTGTTTCAACATTGAATACAATGCCAAGAAAATTGCTGGGCTGAGTAGTCCTCAGAAAATGCAAAGAAAGCTAATATTTGATGTTGTTAGTGACATTCTAGCTCAGAAACTGATATTGGAAAGTTCTACTCCGTGGTGCCAGTCGAATCAGCCAATAAGTAGAAAAATAAGAGGGAAGCTGCTGTTGGATGAGCTTTGCACAGAAATTGATAAGTTGCAACATAAAAATAGGAATGACAAACTGATTAACGAGGATGAGAACATGACAAGCCTCCTGTGGGAAGAGTTGATGCACTATCCCTCAATTTACACAAACAGTTACATGGAAATTCCAAATGTTGTGTTGGATGTTGAACGGTTGATCTTCAAAGATTTGATAACTGAAGTTGTGAGAACTGAACTACCTAACCATTCTGGTAAGCACTGCAGACAACAACTATTTTCCAAGTAG 2583 0.4111 MGKNVKVAGENQQFSTESSGTSMSSSSRSSSMSSLEFSRAIQIEPPSIISPMKIPENSNPEIEVKQHGNKGPHSLDFYDIVKDSMHRDVQGLSVKIVAKGEKKGRILKHVDSPRPLEPPKPVNMVAWDSPRLSYDGRDTQDSLKSARKPKELPRLSLDSREGSIKSFNEGTKCRGLLKGLQKGYGSSGTMFKQLQEPETSRRSSSVVARLMGLETFPGGTEACDIQPRICSSKNESDAESCTNESASMKGSTFLQFRRDASILNVTPYSRFSLESEASQGSQIQVSKRSESSAKASNQSLSVYGEIEKRIADIEFKNSGKDLRALKQILDAMQRYKESFEITRDQTSNSLSDHRSNNSLSENSVVKSPRIRQKDPASTPSEMRNSTQGSKSPIFTMKPAKAAGKTGKFGSANTANGIVGEKLDRKTAKGISPAIRQAKDSLGQPFHSVDKSNNKMRTSKFLQSPKVAQVINGENATNSNNTTGAKSPRLQKKFGLERRSPTTIPSSESCSNRRQHNRQSVELSSPSTTPRQRFNETKNQREDFKQEVGVKVIQTDQSNAAKDLSKESFQVEKIITAEQPSPVSVLDAAFYNEEPPSPVKKKSDITRDLDDTLYDSSEENSEDLPLLSNNAKANFSSRTQNLVQILHQIDSNDERFTNFRDYNDPDHKYISEILLASGLLSSPSSSYDFHSSSHPINPKLFLALEQINTNKNCFNIEYNAKKIAGLSSPQKMQRKLIFDVVSDILAQKLILESSTPWCQSNQPISRKIRGKLLLDELCTEIDKLQHKNRNDKLINEDENMTSLLWEELMHYPSIYTNSYMEIPNVVLDVERLIFKDLITEVVRTELPNHSGKHCRQQLFSK 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00396 860 MobiDBLite consensus disorder prediction 373 393 - -
Vian8g00396 860 MobiDBLite consensus disorder prediction 1 37 - -
Vian8g00396 860 MobiDBLite consensus disorder prediction 445 487 - -
Vian8g00396 860 MobiDBLite consensus disorder prediction 130 151 - -
Vian8g00396 860 MobiDBLite consensus disorder prediction 342 394 - -
Vian8g00396 860 MobiDBLite consensus disorder prediction 134 151 - -
Vian8g00396 860 MobiDBLite consensus disorder prediction 276 299 - -
Vian8g00396 860 MobiDBLite consensus disorder prediction 499 533 - -
Vian8g00396 860 MobiDBLite consensus disorder prediction 8 37 - -
Vian8g00396 860 MobiDBLite consensus disorder prediction 342 366 - -
Vian8g00396 860 PANTHER LONGIFOLIA PROTEIN 7 858 IPR033334 GO:0051513
Vian8g00396 860 Pfam Domain of unknown function (DUF4378) 665 839 IPR025486 -
Vian8g00396 860 MobiDBLite consensus disorder prediction 434 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00396 Vian-Chr8 6575354 6578246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00396 68 859 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 30.481 8.45e-69 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00396 - - vra:106774015 1538.09