Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00395 ATGATCAATAGTATAAAAGAAGCAGATTTTCCACTGAAACAGGAAGGTGTTTCTTCAAGTGATCATGAAAAGGCAAAGGCTTCATCGAGTTCATCTTCTCAGTGGCTGAAACTGAAGGATCCAAGGATTGTTCGTGTGTCTCGAGCCTTTGGAGGAAAAGACAGGCACAGCAAAGTGTGCACAGTAAGAGGGCTAAGAGATAGGAGAGTGAGGCTTTCAGTGCCAACAGCAATTCATCTCTACGACCTTCAAGATAGGCTTGGACTGAATCAACCCAGCAAGGTTGTTGATTGGTTGCTGAATGCAGCAAAACACGAAATTGATGAACTTCCACCACTTCCAATTCCTCCAGGTAACTTCACCCTTGGTTATCCATCTCTTGTTGCTTGTAATGAAGTTAGCACCTCTCGTGAAGGTTCAGGCCAAAACACAAACACTTTGTGGAAATCAAAGTCAGGAGAAATGGTTAGTGATAAAGCAAATTGGATAAACAGAAATGAAGAAGATAACAGTAATAATAATAATAATACTAATACTGCTGGTGATTGTGATAATAAACACTGTCATGGTGCACATGTTTTTTCAAATAATCTCTTGCCAAGACCAAACCATCCTTCATTTTTGGGGTTGATGAACACCATGCCATCACTTGGTTACCAATGGGAGACTAATTCAGGTGATGTTGCTCATTGGGCAAACCATGGATTTGTTAATCAAACAGATATACACAGCATTAATGTAGTTCCAATCCCCTCAACTTTGGCTCTATCAACTGGGAATACTACTACTCCTCAGATTTTGGTGTGTCCTTCTGGAGCAACACAGCCATATTTCCCTTCACATGTTGCAGCAATGGAGATGAATGCGAGACAACTCAACCACTATCAGATGCTGACTTCAGGATCTCAAAATCTCTTCGCAAATTCATCTCAACAACTCATGAGCCAATCTGGGAAAGTGCCATTCAGCTTGGTTAGGCCTAAACTTTTCCATTCTCCTAACAGCAGTGAAAGTCATTCTCGTAAAGACCAGGATTTTCCTTCCAAGTGA 1050 0.4114 MINSIKEADFPLKQEGVSSSDHEKAKASSSSSSQWLKLKDPRIVRVSRAFGGKDRHSKVCTVRGLRDRRVRLSVPTAIHLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLPIPPGNFTLGYPSLVACNEVSTSREGSGQNTNTLWKSKSGEMVSDKANWINRNEEDNSNNNNNTNTAGDCDNKHCHGAHVFSNNLLPRPNHPSFLGLMNTMPSLGYQWETNSGDVAHWANHGFVNQTDIHSINVVPIPSTLALSTGNTTTPQILVCPSGATQPYFPSHVAAMEMNARQLNHYQMLTSGSQNLFANSSQQLMSQSGKVPFSLVRPKLFHSPNSSESHSRKDQDFPSK 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00395 349 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 16 316 IPR005333 GO:0003700
Vian8g00395 349 MobiDBLite consensus disorder prediction 335 349 - -
Vian8g00395 349 ProSiteProfiles TCP domain profile. 52 110 IPR017887 -
Vian8g00395 349 Pfam TCP family transcription factor 52 178 IPR017887 -
Vian8g00395 349 MobiDBLite consensus disorder prediction 1 33 - -
Vian8g00395 349 MobiDBLite consensus disorder prediction 328 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00395 Vian-Chr8 6562997 6564046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00395 35 297 TCP Transcription Factor Family AT3G02150 42.599 3.78e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vian8g00395 TCP 3.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00395 - - aprc:113867214 497.664