Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00390 ATGACAATGACCTTTGTGAGAACGAAAACGATCATCATCATCGAGAAAGATAATGAGAGTGACAACCAAGTTGGGAACTTTGTGGGGGGCCTTTTGAGTGGAGCTTTGATAGGACAAGAAACTGAGAGTGGCTTCATTCGAGGGGCTGCTGTTGGAGCCATATCAAGAACTGTATTTTCCATTGAAGTGTTTGAATCGTCTCTTGTTCTTTGA 213 0.4272 MTMTFVRTKTIIIIEKDNESDNQVGNFVGGLLSGALIGQETESGFIRGAAVGAISRTVFSIEVFESSLVL 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00390 70 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 24 69 IPR044523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00390 Vian-Chr8 6486539 6496596 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00390 24 70 C3H Transcription Factor Family AT5G66070 80.851 2.28e-17 70.9