Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00357 ATGGAGGATAGGATGAAGAAGACGGTGCTTTCTCCACCCATTGTGCTTCTCTTTCTAGCTTTCTCACTTCTTCTCTTGCTTCCAGAAGCTTCGGCTACAAAGTTTAACGTTGGAGATAGCAAGTTTTGGAACCCCAATATCAACTACACTGAATGGGCCAAAGGAAAACATTTCTACCTTGGAGATTGGCTGTATTTTGTTTACGACAGGAACCAAGCTAGCGTGCTGGAAGTGAACAAGACCGATTATGAGACTTGTAACTCTGATCATCCACTCACAAACTGGACAAGGGGTGCAGGAAGAGATGTGGTTCCTCTAAATGTAACCAAAACCTACTACATCATCAGTGGCAAAGGGTTCTGCTTCAGTGGCATGAAGGTGGCTGTTCATGTCGAAAAGCTACCACCTCCACCGAAAGCCGCCCCTGTAAAATCCGGCGCACCAACACTCTTCTCCACCGGCCACATTCTTCTCATGCCGGTTGTTTTTGCCGTCGGAGCAGCGTGGGATGCATTCATTCATTTCTGGTAG 531 0.4708 MEDRMKKTVLSPPIVLLFLAFSLLLLLPEASATKFNVGDSKFWNPNINYTEWAKGKHFYLGDWLYFVYDRNQASVLEVNKTDYETCNSDHPLTNWTRGAGRDVVPLNVTKTYYIISGKGFCFSGMKVAVHVEKLPPPPKAAPVKSGAPTLFSTGHILLMPVVFAVGAAWDAFIHFW 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00357 176 PANTHER BLUE COPPER PROTEIN 32 138 IPR039391 GO:0009055
Vian8g00357 176 Pfam Plastocyanin-like domain 43 125 IPR003245 GO:0009055
Vian8g00357 176 Gene3D - 31 134 IPR008972 -
Vian8g00357 176 SUPERFAMILY Cupredoxins 32 131 IPR008972 -
Vian8g00357 176 ProSiteProfiles Phytocyanin domain profile. 33 133 IPR003245 GO:0009055
Vian8g00357 176 FunFam Lamin-like protein 31 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00357 Vian-Chr8 6031435 6033501 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00357 14 176 Phytocyanin Superfamily AT5G15350 58.788 6.75e-70 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00357 - - gmx:100305564 300.056