Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00355 ATGACGATGTGGAAGAACATGACGGTGGTGATGGCCAGTGTAGTGGTGATGGGGTGGTTGTCATGGGTGGTGATGGGAAATCCAGTGCTTCATAAGGTGGGAGGCTCCAAAGGTTGGATCAATAATCATGATGTCAACTACACTGAATGGTCTGCCCAAGAACATGTCTATGTTGGAGATTGGCTTTTGTTCACGTTTGACAAAAGATACTTCAATGTTCTGGAGGTGAACAAGACAAGCTACGAGAACTGCATAGACAGAGATTTCATAAGCAACGTGACAAGAGGTGGTCGTGATGTGGTGCAGATGACAGAGGCAAAGACCTATTACTACCTCTCAGGTGGAGGCTACTGTTTCCATGGCATGAAAGTTGCTGTGCATGTTCAACAACATCCTGCAATGGCACCAGCTCCATCCATGCCTGTCTCTGCTTCTCTTTTGCCCTCGCTCACGTCTTCCTGCGTTTCGATCCTTCTCGTTAATGTCGTTTATTATGTCAACTTCCTTTTCATGGATGGTTCGTGTCTGCTGAGCTTTTCTTAG 543 0.4641 MTMWKNMTVVMASVVVMGWLSWVVMGNPVLHKVGGSKGWINNHDVNYTEWSAQEHVYVGDWLLFTFDKRYFNVLEVNKTSYENCIDRDFISNVTRGGRDVVQMTEAKTYYYLSGGGYCFHGMKVAVHVQQHPAMAPAPSMPVSASLLPSLTSSCVSILLVNVVYYVNFLFMDGSCLLSFS 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00355 180 SUPERFAMILY Cupredoxins 30 129 IPR008972 -
Vian8g00355 180 ProSiteProfiles Phytocyanin domain profile. 29 130 IPR003245 GO:0009055
Vian8g00355 180 PANTHER BLUE COPPER PROTEIN 30 135 IPR039391 GO:0009055
Vian8g00355 180 Gene3D - 29 133 IPR008972 -
Vian8g00355 180 Pfam Plastocyanin-like domain 39 122 IPR003245 GO:0009055
Vian8g00355 180 FunFam Lamin-like protein 27 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00355 Vian-Chr8 6019983 6022681 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00355 30 148 Phytocyanin Superfamily AT2G27035 47.500 2.04e-38 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00355 - - gmx:100788336 239.58