Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00326 ATGGATGCAATGGAGAACTATTATTATAGCCAGAGAGACACAATGGCAGAGGAAGCGTTTGATTTGCCACCAGGGTTCAGGTTCCATCCCACGGATGAAGAACTCATCACTCATTACCTCTCACAGAAGGTTCTTGACAACTGCTTCTGCTCTAGGGCCATTGGAGAGGCTGATTTGAACAAGTGCGAGCCATGGGATTTGCCTTGTATGGCAAAAATGGGTGAAAAGGAGTGGTATTTTTTCTCCGTGAGGGACAGAAAATACCCAACTGGGCAAAGGACTAATAGAGCCACCGGTGCTGGTTACTGGAAGGCCACGGGCAAAGACAAAGAGATATACAAGGCAAAGAAACTCATTGGGATGAAGAAAACTCTGGTTTTCTACAAAGGAAGAGCTCCGAGTGGTGAAAAAACCAACTGGGTCATGCATGAATACAGACTAGAAGACGATCATTCTATGCACAATCCACACAAAAAGGCCATGAATGATTGGGCCATCTGCAGGATTTTTGAGAAGACCAACTGCGGGAAGAAAATGCAGATTTCTGGTTTGGTGAGGTTGAGTTCCTTTGGGAAGGAGATGCCTTCATTGATGGATTCTTCTCAATACAACACGAGTGAAGCAAAACCTGTTTTGGGGGAATCATCACATTTGTCATCAGATCGAAACCAGAGTGATGAAAACATAGCTGAGAGCTTAGAAACTCTGATGATGGCATCTTCATCTTCGTATTCTTCAAACCCCTTTGATGTTTCCCCTGCTTCTTGGAGTGTGCCACACCAATCCCTCCAAGCTGGGAACTCAAACTATTCCATGGATGAGGAACAACAGTCCATGTTGGGGATGCTGATTGAAAACCATGGATCAAGCACAACCCTAAGAACTCATAAAGCACTTGATAATGACTTTGATGCTGACACTTCCTCTCTCATCTACAATGATGAAATCTTTCACAGATCATTCGGGAACCAGGAATATTCATCACCTTCTCTGTGGGGATTCTAA 1005 0.4418 MDAMENYYYSQRDTMAEEAFDLPPGFRFHPTDEELITHYLSQKVLDNCFCSRAIGEADLNKCEPWDLPCMAKMGEKEWYFFSVRDRKYPTGQRTNRATGAGYWKATGKDKEIYKAKKLIGMKKTLVFYKGRAPSGEKTNWVMHEYRLEDDHSMHNPHKKAMNDWAICRIFEKTNCGKKMQISGLVRLSSFGKEMPSLMDSSQYNTSEAKPVLGESSHLSSDRNQSDENIAESLETLMMASSSSYSSNPFDVSPASWSVPHQSLQAGNSNYSMDEEQQSMLGMLIENHGSSTTLRTHKALDNDFDADTSSLIYNDEIFHRSFGNQEYSSPSLWGF 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00326 334 FunFam NAC domain-containing protein 100-like 31 176 - -
Vian8g00326 334 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 21 259 - -
Vian8g00326 334 Pfam No apical meristem (NAM) protein 23 147 IPR003441 GO:0003677|GO:0006355
Vian8g00326 334 Gene3D NAC domain 31 176 IPR036093 GO:0003677|GO:0006355
Vian8g00326 334 MobiDBLite consensus disorder prediction 198 225 - -
Vian8g00326 334 ProSiteProfiles NAC domain profile. 22 172 IPR003441 GO:0003677|GO:0006355
Vian8g00326 334 SUPERFAMILY NAC domain 15 172 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00326 Vian-Chr8 5583662 5584837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00326 21 330 NAC Transcription Factor Family AT5G07680 51.104 1.43e-99 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vian8g00326 NAM 2.8e-40 No_clan