Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00268 ATGGACGCTCTCCGAGAGAGAGCGACGGTCGTAAAGGAGTCACTTCACAAGAGCCAGACCATCACCGATAACATGGTCTCCATTCTCGGTTCCTTCGATCATCGTCTCTCCGCACTCGAAACTGCCATGCGTCCCACTCAGATAAAAACGCATTCAATTCGTAGTGCACATGATAACATTGACAAGACTCTAAAAGCAGCAGAGGGGATTTTGGCTCAATTCGACCAGACACGAATGGCGGAGGCTAAAATACTTCGAGGGCCGCACGAGGATCTAGAAAGCTATTTAGGAGCAGTTGATCAGTTGAGGGCAAATGTTCGTTTCTTTAGTAGTAAAAAGAGCTTCAAAAGTAGCGAGGCTATGGTCACCCATGCTAATAACTTGCTTGCCAAAGCTATCACAAAGTTAGAAGAGGAATTCAAACATCTTTTGACAAATTATAGTAAACCTGTGGAACCTGATCGCCTTTTCGAGTGCCTACCAAACTCCCTAAGGCCCTCAAATTCTGGGAAGCAAAGTGAGGGTGGTGGAAGAAACCACTCCGGAAAACAAAGTTCAGAAGCTGTCACTTTCGCACTTCCAACTCTCATTCCACCAAGAGTCATACCTTTGCTACATGATTTAGCACAACAAATGGTTCAAGCTGGTCATCAACAACAACTTTTTCGAATATACAGAGAAACCCGAGCGACAGTCCTGGAACAAAGTCTTAGGAAGTTAGGTGTCGAAAGGTTGAGTAAGGATGACGTTCAGAGAATGCAATGGGAGGTTTTGGAGGCAAAGATTGGCAATTGGATTCATTACATGAGGATTGCTGTCAAATTGTTGATTGCTGGAGAGAAGAAAATTTGTGATCAAATATTTGATGGTGTGGACTCTTTGAAATCTCAATGTTTTGCTGAAGTCACTGCTAGTAGTGTGGCTATGCTTCTTAGTTTTGGAGAGGCTGTTGCAAAAAGTAAGAGGTCACCTGAGAAATTATTTGTTCTTTTAGACATGTATGAGATAATGAGAGAGCTTCAACCAGAGATTGAGAAACTTTTTGAAAGTAAGGCATGCACTGAAATGAGAGAAGCTGCAATAAATTTGTCAAAGAGATTAGCTCAAACTGCCCAAGAAACCTTTGTTGATTTTGAGGAAGCAGTTGAAAAAGATGCCACTAAAACTACTGTAATGGATGGAACTGTTCACCCTTTAACCAGCTACGTGATCAATTACGTGAAGTTTCTTTATCAATCAACCTTGAAACTACTTTTTCATGAGTTTGATCCCAATGACCCGGACGGACAATTAGCAATTATTACAACAAGGATTATGCAGGCTCTCCAAACTAACTTGGATGGAAAATCAAAACAATATAAAGATCCAGCACTGACCCAGTTGTTTCTTATGAATAACATCCATTACATAGTGAGATCTGTGAGAAGGTCAGAGGCAAAGGACATGTTAGGAGATGATTGGGTGCAAATACATAGAAGAATTGTGCAACAGCATGCAAATCAGTATAAAAGGATTTCTTGGGCAAAGATTTTACAATGCCTCACTGTCCCAGCAAGTGAAAACAATAATGCAGTCACAAGAACAATGATTAAAGATAGATTCAAGACATTTAACGATCAAATTGAAGAGCTTCATCAACGGCAATCTCAATGGACTGTTCCCGACAGTGAATTGCGTGAATCTCTCAGATTGGCTGTTGCTGAAGTCTTGTTGCCCGCATATAGATCTTTCCTAAAACGTTTTGGGCCCGTGATAGAGAACGGCAAAAATCCTTATAAGTACATGGTATATTCTCCTGAACATCTTGAGCAAATGCTGGGTGAATTTTTTGAAAGCAAGATATGGGGTGAACCAAAGCGATAA 1863 0.4101 MDALRERATVVKESLHKSQTITDNMVSILGSFDHRLSALETAMRPTQIKTHSIRSAHDNIDKTLKAAEGILAQFDQTRMAEAKILRGPHEDLESYLGAVDQLRANVRFFSSKKSFKSSEAMVTHANNLLAKAITKLEEEFKHLLTNYSKPVEPDRLFECLPNSLRPSNSGKQSEGGGRNHSGKQSSEAVTFALPTLIPPRVIPLLHDLAQQMVQAGHQQQLFRIYRETRATVLEQSLRKLGVERLSKDDVQRMQWEVLEAKIGNWIHYMRIAVKLLIAGEKKICDQIFDGVDSLKSQCFAEVTASSVAMLLSFGEAVAKSKRSPEKLFVLLDMYEIMRELQPEIEKLFESKACTEMREAAINLSKRLAQTAQETFVDFEEAVEKDATKTTVMDGTVHPLTSYVINYVKFLYQSTLKLLFHEFDPNDPDGQLAIITTRIMQALQTNLDGKSKQYKDPALTQLFLMNNIHYIVRSVRRSEAKDMLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTVPASENNNAVTRTMIKDRFKTFNDQIEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFLKRFGPVIENGKNPYKYMVYSPEHLEQMLGEFFESKIWGEPKR 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00268 620 PANTHER EXOCYST COMPLEX PROTEIN EXO70 51 611 IPR004140 GO:0000145|GO:0006887
Vian8g00268 620 MobiDBLite consensus disorder prediction 162 184 - -
Vian8g00268 620 Pfam Exo70 exocyst complex subunit 264 607 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vian8g00268 620 Gene3D Exocyst complex component Exo70 69 620 - -
Vian8g00268 620 SUPERFAMILY Cullin repeat-like 70 611 IPR016159 -
Vian8g00268 620 MobiDBLite consensus disorder prediction 160 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00268 Vian-Chr8 4316404 4329647 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00268 1 620 EXO70 exocyst subunit family AT5G52340 77.831 0.0 1010
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00268 K07195 - gmx:100779774 1140.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g00268 8 4316404 4329647 Vian8g00268 8 4316404 4329647 ECH