Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00208 ATGGATGTGATGATTTCCTTGTTTGATGGAAAAACTATTGATGGGATTGATGCAGATACCATGATCAAATCCACTGTGCTGACTGTGATTTCAGGAGCAACTGACACAACTAATGTTGTTCTTATATGGACAATATCTTTGATATTGAGAAATCCTTCTGTACTGGAAAAAGTTAAAACCGAGCTAGACATTCAAATTGGGAAAGAGAGATTGGTAAGTGAGTCAGACATAAATAAGTTAACATATCTTCAAGCCATAGTCAAAGAAACTTTGAGATTGTATCCTCCTGGTCCTCTTTCGGGACCTCGTGAATTCACAGATAATTGCACTTTAAATGGTTATAACATTGAAAAGGGAACTCGTCTAATTACAAATCTTTGGAAGATTCAGACAGATAGCAATGTTTGGGAAGACCCGTTGGAATTCAAACCAGAAAGATTTCTAACAACTCACAAAGATGTTGATATCAAAGGTCAACACTTTGAGTTATTACCATTTGGAAGTGGTAGAAGAATGTGTCCAGGAGTATCCTTTGGCCTTCAAATGGTGCATTTTATTCTTGCTTCTTTTTTACATTCTTTTGAAATTCTAAGTGCATCATCTGATCCTATTGATATGACTGAAACCTTTGGATTAACCAATACCAAAACCACTCCACTTGAGATTCTTGTTAAACCACGTCTATCTTTTACTTGTTATGAAAACTTCTAA 711 0.3544 MDVMISLFDGKTIDGIDADTMIKSTVLTVISGATDTTNVVLIWTISLILRNPSVLEKVKTELDIQIGKERLVSESDINKLTYLQAIVKETLRLYPPGPLSGPREFTDNCTLNGYNIEKGTRLITNLWKIQTDSNVWEDPLEFKPERFLTTHKDVDIKGQHFELLPFGSGRRMCPGVSFGLQMVHFILASFLHSFEILSASSDPIDMTETFGLTNTKTTPLEILVKPRLSFTCYENF 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00208 236 PRINTS P450 superfamily signature 85 96 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00208 236 PRINTS P450 superfamily signature 32 49 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00208 236 PRINTS P450 superfamily signature 164 173 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00208 236 Pfam Cytochrome P450 19 214 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00208 236 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 166 175 IPR017972 GO:0005506|GO:0016705
Vian8g00208 236 PRINTS E-class P450 group I signature 84 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00208 236 PRINTS E-class P450 group I signature 125 149 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00208 236 PRINTS E-class P450 group I signature 173 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00208 236 PRINTS E-class P450 group I signature 41 67 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00208 236 PRINTS E-class P450 group I signature 21 38 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00208 236 PRINTS E-class P450 group I signature 163 173 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00208 236 SUPERFAMILY Cytochrome P450 2 227 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00208 236 FunFam Uncharacterized protein 1 229 - -
Vian8g00208 236 Gene3D Cytochrome P450 2 230 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00208 236 PANTHER CYTOCHROME P450 82C3-RELATED 1 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00208 Vian-Chr8 2931907 2933313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00208 1 228 Cytochrome P450 AT4G31950 54.113 3.09e-85 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00208 - - gmx:100805047 394.045