Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00190 ATGGATTTGTTCCTTGTGAGTAACCTAAACACCACTGCACTTGCTCTCTTTTCTCTAACATTACTGTTATCTTTCTCTCTATTTCTCTTTCGTCCCTCCAAAGCCGGTAGTAATCTGCCAGAACCTCCAATGGCCTCAGGTGCATGGCCCATACTCGGCCATCTCATGCTTCTCGGGGGCTCACCAACACCCCACAAGACGTTGGCAGCCATGGCTGACAAATATGGACCCCTCTTCACCATCAAGCTCGGTTCTAGACGCGCTTTGGTTCTCAGCAACTGGAAAATGACGAAAGAATGTTACACCACAAACGACGTCGTCGTCTCCTCTCGCTCCAAGCTCGTGGCCATTGAACACGTTGCGTACAACCAAGCAAGTTTTGGGTTCGCACCCTATGGTCCTTACTGGCGTGAGATACGGAAGATTGTGACCATGTTCCTCTCCGACCGCAAAACGGAGCTTCTAAGCCGCGTTAGGGTTTCTGAGATTCGAAGTTCTGTTAAAGAGCTGTTTCATGTTTGGTCGGAGAAGAAGGGGAGTGATGAGTGTGTGGTGGTGGAGATGAAGCAGTGGTTCACAGAGTTGGTGTTCAATATAGTTTTCCAAACCATGGCTGGGAAGCGATTATTTGGTAAAACCGCAGTGGTTAGTGAGAAAGATGCAGAAAAGTGTGTGAAGGCTTTGAGGGAGTTCATGCAGATGTTGGGAGTGTGCACGGTGGCTGATGCTGTTCCTGTTCTGAGGTGGATGAATTTGGGAGTGAAAGCCATGAAAGAAACTGCCAGAGAATTGGATGTGATCTTAGATGAGTGGTTGGTGGAGCACAGCAAGAAGAGGGCTTTATTTGGTGAAAAGGGTGTTGAAAGTGACGACCAAGACTTCATGGATACGATGCTTTCAGTTCTTGAAGGTGCCACCATCGATGGCTTCGATGCTGCTACTATAAACAAAGCCACAACATTGGCACTGATTTTGGGTGCCACGGATACAAGCACTGTCACTCTTACATGGGTGATATGTTTCTTGTTGAAAAATCCTCTTATATTAGAAAAGGTAAAAGAAGAGATTAGCACTCACATTGGGAAAGAGAGATTCATAAGTGAGTCAGATGTGAATAAGTTAGTATACCTTCAAGCAGTAGTGAAAGAGACACTGAGATTGTATCCACCAGGACCTCTTTCAGCACCTCGTGAATTCACAGAAGATTGCATGTTAGGTGGATATCACATAAAAAAGGGAACTCGATTAATCACAAACTTGTGGAAGATCCAAACTGATCCTAATATTTGGTTGGATCCATTGAAATTCAAACCAGAAAGATTTATTACTACTCACAGAGATGTTGATGTTAAAGGTCAAAATTTTGAGTTGCTACCGTTTGGAAGTGGCAGAAGAATATGTCCAGGAATATCCTTTGGTCTTAACATGATTCATTTAACTCTAGCTAATTTCTTACATTCTTTTGAAATATTTAATAAACCTAATGAAACTATTGATATGAGAGAAGCCCTTGGAATGACCAATGAAAAAGCTACTCCACTTGAGATTCTTGTTAAACCACGTTTGTCCTCAAACTATTATGAATCCATGTGA 1593 0.4319 MDLFLVSNLNTTALALFSLTLLLSFSLFLFRPSKAGSNLPEPPMASGAWPILGHLMLLGGSPTPHKTLAAMADKYGPLFTIKLGSRRALVLSNWKMTKECYTTNDVVVSSRSKLVAIEHVAYNQASFGFAPYGPYWREIRKIVTMFLSDRKTELLSRVRVSEIRSSVKELFHVWSEKKGSDECVVVEMKQWFTELVFNIVFQTMAGKRLFGKTAVVSEKDAEKCVKALREFMQMLGVCTVADAVPVLRWMNLGVKAMKETARELDVILDEWLVEHSKKRALFGEKGVESDDQDFMDTMLSVLEGATIDGFDAATINKATTLALILGATDTSTVTLTWVICFLLKNPLILEKVKEEISTHIGKERFISESDVNKLVYLQAVVKETLRLYPPGPLSAPREFTEDCMLGGYHIKKGTRLITNLWKIQTDPNIWLDPLKFKPERFITTHRDVDVKGQNFELLPFGSGRRICPGISFGLNMIHLTLANFLHSFEIFNKPNETIDMREALGMTNEKATPLEILVKPRLSSNYYESM 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00190 530 CDD CYP82 76 521 - -
Vian8g00190 530 PANTHER CYTOCHROME P450 82C3-RELATED 23 527 - -
Vian8g00190 530 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00190 530 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00190 530 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00190 530 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00190 530 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00190 530 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00190 530 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00190 530 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00190 530 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00190 530 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00190 530 FunFam Cytochrome P450 82C4 33 519 - -
Vian8g00190 530 Pfam Cytochrome P450 44 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00190 530 SUPERFAMILY Cytochrome P450 47 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00190 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Vian8g00190 530 Gene3D Cytochrome P450 31 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00190 Vian-Chr8 2547588 2550135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00190 9 527 Cytochrome P450 AT4G31940 46.038 1.95e-169 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00190 - - pvu:PHAVU_004G021100g 870.152