Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00157 ATGTCGAAAATTACAGCAGTAGGATGTTTGTTTTTAGCAATTTTTGTTGGAGTGCAATTGAAGTGCATATTGGTTGGAGTGCAATTGAAGTGTGGTGAGAGTGTAACCGTTCAAATCACGAATCGCTTAAACATGAGATATTTGGCTGTTCAGTGCAAGGACAAGCATAATGATCTTGGGTTGCAACAACTCAATGTTGGCGAAACATATAGTTTTAAGTTCGAACCACAGATTATTCTTCCTACGACATTATACTTTTGTCATTTTGTTTGGTTGGAAGGAGATCATTATTTTGACATATATGTTCAAACTCGAGATACATTCTGCAGTAATAAAGGTAGTACTTGTATTTGGGACATATTTCCCACTGGACCATGTTGCACCAATAAAGATCCTCGACAATGCTATGGATGGAATCCACCCTCTGCAGCCCAACAAAGTAACAATACTTTACTTGTATGA 462 0.3745 MSKITAVGCLFLAIFVGVQLKCILVGVQLKCGESVTVQITNRLNMRYLAVQCKDKHNDLGLQQLNVGETYSFKFEPQIILPTTLYFCHFVWLEGDHYFDIYVQTRDTFCSNKGSTCIWDIFPTGPCCTNKDPRQCYGWNPPSAAQQSNNTLLV 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00157 153 PANTHER - 33 133 IPR010264 -
Vian8g00157 153 Pfam Plant self-incompatibility protein S1 36 138 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00157 Vian-Chr8 1932649 1935819 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00157 35 142 Carbohydrate Esterase AT3G16970 39.823 2.92e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00157 - - pvu:PHAVU_004G010300g 186.422