Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00155 ATGTCGAAAGTTACATCAGTAGGTTTTTTGTTTTTAACAATATTTGTTGGAGTGCAATTGAAGTGTGGTGAGAGTAGTGTTCCTCTTCTTCCTACTAAAGTAACCGTTCAAATAACAAATCGCTTAAGCATGAGATATTTGGCTGTTCAGTGCAAAGACAAACACAGTGATCTTGGGGTGCAACAACTCAATGTTGGGGAAACATATAGTTTTAAGTTCTTTCCTAAGTATTATTTTCCTACGACATTGTACTTTTGTCATTTTATTTGGTTGGAAGGAGATCATTATTTTGACATATATGACCAAGATCGAGATGGATATTGCAGTGGTAATACTTGTACTTGGGATATATTTCCCACTGGACCATGTCGCACCAATAAAGATCCTCGACTGTGCTTTGGATGGAATCCACCCTCTGCAGCCCAACAAAATAATAACAACACTCTACTTGTATGA 456 0.3706 MSKVTSVGFLFLTIFVGVQLKCGESSVPLLPTKVTVQITNRLSMRYLAVQCKDKHSDLGVQQLNVGETYSFKFFPKYYFPTTLYFCHFIWLEGDHYFDIYDQDRDGYCSGNTCTWDIFPTGPCRTNKDPRLCFGWNPPSAAQQNNNNTLLV 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00155 151 Pfam Plant self-incompatibility protein S1 35 135 IPR010264 -
Vian8g00155 151 PANTHER - 31 130 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00155 Vian-Chr8 1917330 1917785 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00155 16 139 Carbohydrate Esterase AT3G16970 38.406 7.02e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00155 - - pvu:PHAVU_004G003100g 186.422