Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00154 ATGGATTCAATCTCCAAAATGATGAGAATATTTTGTTTGTTGTTTCTTGTTCTGCAATTGACAGGTATCGTCACTGCAATTCCATTTTTTCCTACAAAAGTTTCAGTTGAAATAACAAACAAATTAAGTAGGAAGGATTTGCATCTTCACTGCAAAGACAAGCATAACGATCTGGGTATTGTCGAACTAAAGGTTAATGAAACATATAGTTTTCGATTTTACCCTCAATTCTTTTTTCCTTCAACCTTGTACTTTTGTCATTTCACATGGTTGTATGGTGATCATCGTTTTGACATTTATGTAGAATACAGAGATTTATATTGTATCCACAATCTCTGCTCGTGGGAGATATTAGAGAACGGACCATGTAAGATTAAAAAATCTGGAAAGCGTGAATGCTTTGCATGGTAA 411 0.3382 MDSISKMMRIFCLLFLVLQLTGIVTAIPFFPTKVSVEITNKLSRKDLHLHCKDKHNDLGIVELKVNETYSFRFYPQFFFPSTLYFCHFTWLYGDHRFDIYVEYRDLYCIHNLCSWEILENGPCKIKKSGKRECFAW 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00154 136 Pfam Plant self-incompatibility protein S1 36 136 IPR010264 -
Vian8g00154 136 PANTHER - 29 126 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00154 Vian-Chr8 1915697 1916107 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00154 22 128 Carbohydrate Esterase AT3G16970 39.316 1.15e-17 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00154 - - pvu:PHAVU_004G003500g 167.162