Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00153 ATGGATTCAATCTCCAAAATACTTTGTTTGATTTTAGTTCTTCTTCTGCAATTGAAAGGTAAAATCACTGCAACTCCAATTCTTCCTACAAAAGTTTCAGTTGAAATAACCAACAAATTAAATATGAAGCATTTGATTGTTAACTGCAAAGACAAACATAACAATCTGGGTGTTATTGAACTATATGTTAATGAAACATATACTTTTCGATTTTATCCTAATTACATTTTTCCTCAAACCTTGTACTTTTGTCACTTCACATGGTTATATAATGATCATCATTTTGACATTTATGTAGAATATAGGGATTTATGGTGTACCCACAATGTCTGTTCTTGGGAGATTTTTGAGAACGGACCATGTAAGATTAAACCTGAATCTCGTCAATGCTTTTCATGGGATAAAGTTTATGCAAAAATTAAATAA 426 0.3005 MDSISKILCLILVLLLQLKGKITATPILPTKVSVEITNKLNMKHLIVNCKDKHNNLGVIELYVNETYTFRFYPNYIFPQTLYFCHFTWLYNDHHFDIYVEYRDLWCTHNVCSWEIFENGPCKIKPESRQCFSWDKVYAKIK 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00153 141 PANTHER - 29 124 IPR010264 -
Vian8g00153 141 Pfam Plant self-incompatibility protein S1 34 133 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00153 Vian-Chr8 1913575 1914000 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00153 8 134 Carbohydrate Esterase AT3G16970 33.333 3.24e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00153 - - pvu:PHAVU_004G003500g 166.777