Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00151 ATGATCTCAATCTCCAAAATTGGGTTGATACTTTCTTTGATTTTAAGAATACTTTCTCCTTTTCCATTGAAAGGAAGTGAGGGTGGAGTTGTAGAAGGTTATACTTTTCCTCCTGACAAAGTAGATATTCTAATATACAATTTTGTTTCAAAGAACTTGACAATTCATTGCAAAGACAAGCATCATGATCTTGGGATATACACATTGAATTATGAGGAAGCTTATAAATTTAGTTTTAAACCTAATTTCTTGAGGAAGGTTACTTTGTACTTTTGTAGTTTTAAATGGATTGGAGGAAGTCATTATTTTGACATTTATAACGAAGATAGAGATGATTGTAGTCAATGTGCATGGACGATATTCAAGAAAGGACCGTGTAAACATTATCCTAACTATGATGTTTGTTTTAAGTGGGAACATTAG 423 0.3168 MISISKIGLILSLILRILSPFPLKGSEGGVVEGYTFPPDKVDILIYNFVSKNLTIHCKDKHHDLGIYTLNYEEAYKFSFKPNFLRKVTLYFCSFKWIGGSHYFDIYNEDRDDCSQCAWTIFKKGPCKHYPNYDVCFKWEH 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00151 140 PANTHER - 40 131 IPR010264 -
Vian8g00151 140 Pfam Plant self-incompatibility protein S1 49 138 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00151 Vian-Chr8 1896206 1896628 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00151 40 139 Carbohydrate Esterase AT3G16970 36.937 3.58e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00151 - - pvu:PHAVU_004G004200g 128.257