Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00141 ATGGTCTCAATCTCCAAAATTGCGTTGCTACTTTCTTTGCATTTAACAATACTTTTTCCTTTGGGTGGAGCAGTAGCTTCAGGAGTAAAAGTTTATATTATTCCTCCTATGAAAGTAGATATTTTAATCTACAATTTTGTTTCAAAGAAGTTGACCATTCATTGCAAAGACAAGCATCATGATCTTGGGACTTTCATATTGAATTATGAGGAAATTTATAAATTTAGTATTAAACCTAATTTCTTTGTGAAGGTTACTTTGTATTTTTGTACTTTTAAATGGGTTGGAGGAAGTCATTCTTTTGACATTTATGATGAAAATAGAGATAATTGTGTTCAATGTGTATGGAGCATATTCGAGACGGGACCGTGTTTGCATTATCGTAAGTATAATGTTTGTTTTCCGTGGAAACATTAG 417 0.3165 MVSISKIALLLSLHLTILFPLGGAVASGVKVYIIPPMKVDILIYNFVSKKLTIHCKDKHHDLGTFILNYEEIYKFSIKPNFFVKVTLYFCTFKWVGGSHSFDIYDENRDNCVQCVWSIFETGPCLHYRKYNVCFPWKH 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00141 138 PANTHER - 40 129 IPR010264 -
Vian8g00141 138 Pfam Plant self-incompatibility protein S1 47 136 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00141 Vian-Chr8 1755648 1756064 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00141 38 136 Carbohydrate Esterase AT3G16970 35.455 1.57e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00141 - - pvu:PHAVU_004G004400g 113.235