Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00133 ATGAATGATCTGGATTGTGGGTTGGAGTCCCTTTGTTCCATTTATGGGGAGATTGTTAGCAGCACTGCACTGTGGGAAAGAAACACTTCTGGAGTGCCAAATGCTGATTTTTTGCTTTTTGGGTGGAGCGAGCTTAATGACATTGGAGGATCTGCAGGGAAAGTGAAAAATACTACTATGTCAGCTGCTGATCAAATGAAGAACTGTGAAACATATCGTGAATGTCCCAAATGTCATTATCATACCAATAACATTGATGTTTCTGATGAGTGGCCTGGTTTTCCTGTTGGTTTAAAGTTTGATCCTTCCGATGTTGAGCTTTTAAAGCATTTGGAAGCAAAGTGTTGTGTTGGAAAGAGAGAGCAACACGTGTTTATTCATAAGTTCATCCCAACTTTAGAAGGGGAGCAAGGGATTTGCTACACTCATCCAGAAAATCTTCCAGGTGCTAGGAAAGATGGGAATAGTGTCCATTTCTTTCACAAAACAGTTAATGCATATGCTACTGGGAGAAGGAAGCGTAGGAAGATTCATCATCAAGATGGTTTGAGTGAGGAGCATGTTCGCTGGCACAAGACTGGTAGAACCAAATCTGTGATAGAAGATGGAGTTCATAAGGGCTTTAAGAAGATCATGGTCCTTTATGTAAGACCTAAGGAAGGGTCCAAGACATATAAGACCAATTGGGTGATGCATCAGTACCATCTGGGGAGTGAAGAAGAGGAGAAGAATGGTGAATATGTGGTTTCAAAAATATTTTATCAACAACAGAAGCATTCTGAGAAGAATGAGGAGAATACAGTAGTTGAAGATTCTAACATAGCAGCACAAACAGGTCCAAGTACCCCAAAACCAAATCCCCCTACTCGACCTTGCACAGGAAAATGTGATGACAATTTTGATGAAAATGAGCTTCTTTCATTCATCCAGGATGCCAAGCCTATACCTGGAGAATTACTTGCGCCACCATCTGATGTTCTGGATGAGGATATTAAGGTTGACCCTGCATGGTTGGCTGATGAATCACAGGCTGATTGTGACTTTCATGGCTTGGAGGAAATCTTGTCAATGTCAGATTCATCTGCACTTTTTAATCATTCTGGATTGCCCTCCACTTTGAATAGCACTGCAAACAACATGGTTGCACCTGGAAACAATGATGATTATGCATCTTCTGGAGTTTCTGTGCTAGACACCCTGGAGATAGATACTCCTTCAGATTTTGATCTTTGTAATTTGCAATTTGGCTCTCAAGACAGCACCCTTCACTGGATGGACAAGCTATAA 1287 0.4134 MNDLDCGLESLCSIYGEIVSSTALWERNTSGVPNADFLLFGWSELNDIGGSAGKVKNTTMSAADQMKNCETYRECPKCHYHTNNIDVSDEWPGFPVGLKFDPSDVELLKHLEAKCCVGKREQHVFIHKFIPTLEGEQGICYTHPENLPGARKDGNSVHFFHKTVNAYATGRRKRRKIHHQDGLSEEHVRWHKTGRTKSVIEDGVHKGFKKIMVLYVRPKEGSKTYKTNWVMHQYHLGSEEEEKNGEYVVSKIFYQQQKHSEKNEENTVVEDSNIAAQTGPSTPKPNPPTRPCTGKCDDNFDENELLSFIQDAKPIPGELLAPPSDVLDEDIKVDPAWLADESQADCDFHGLEEILSMSDSSALFNHSGLPSTLNSTANNMVAPGNNDDYASSGVSVLDTLEIDTPSDFDLCNLQFGSQDSTLHWMDKL 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00133 428 ProSiteProfiles NAC domain profile. 94 255 IPR003441 GO:0003677|GO:0006355
Vian8g00133 428 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 47 332 IPR044799 GO:0003700
Vian8g00133 428 FunFam NAC domain-containing protein 8 103 259 - -
Vian8g00133 428 SUPERFAMILY NAC domain 79 255 IPR036093 GO:0003677|GO:0006355
Vian8g00133 428 Gene3D NAC domain 103 260 IPR036093 GO:0003677|GO:0006355
Vian8g00133 428 Pfam No apical meristem (NAM) protein 95 236 IPR003441 GO:0003677|GO:0006355
Vian8g00133 428 MobiDBLite consensus disorder prediction 274 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00133 Vian-Chr8 1678583 1682568 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00133 54 257 NAC Transcription Factor Family AT1G28470 49.107 1.59e-64 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vian8g00133 NAM 3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00133 - - vun:114182499 700.664