Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00123 ATGGCCATGTTTCTTCTCTATGCAGCCTTATTAGCATCATTCCTTTGCTCCCTATACTTCTTCCATCGCAGAACACAATGCATACACCCCCTCTTGAGAGATTACTTCATTCTCGGCATGCTACCGCCGGTGCTCTTCAACCTGTGGAGGATCCATGATTTTATCACTGAGGTTCTGAAACTTCGTGGTGGCACCGGGGAGTTCAAAGGGCCATGGTTCACCAAAATGAACTATTTGATCACTTGTGACTCCCTCAACGTGCAACACATGCTGTGCAAGCGCTTCGACAACTACATCAAGGGACCCGAGTTTCGTGAGATTTTCGAACCCTTCGGAGATGGGGTTGTCACTGCCGATTCAGACACATGGAAGTACTTCAGAACCGTTCTCCATTCTTTGATCAAACAAAGAAGGTTCGATGTGTTTGTTGATCAAACCGTTCAGAAGAAAGTGTACACAAGCCTGCTTCCGATATTGGATCATGCACAACAACAAGGAAGAGTGGTGGATCTTCAGGATATCTTCAACCGATTCACATTCGATAACATATGCTCCACAATCGTAGGACACGATCCTAAGTGTCTTTCCATTGACTTTCCCGAAGTTGCGATCGAAAAGGCTTTTAATGAGTGTGAAGAGTCGATATTCTACAGACACGTAGTGCCGGGAAGTGTTTGGAAGCTCCAAAAATGGCTCCAAATTGGTCAAGAGAAGAAGATGACAGAGGCGTGCAGAACGTTTGACGATTTCATATATTCATGCATAGCGTCCAAGCGAGAAGAGTTAAGCAAGTGCAGCAGAGAAGAAATGGAGGAAGCTCCTTTTGACTTGCTTACTGCTTTGATCACAGAAGAGAGAGGACGTTTGCATGATGACAAGTTTCTAAGAGATGGTGCGTTTAACTTCTTTGTTGCAGGGAGAGAAACCATGACTTCAGCTCTTACGTGGTTCTTTTGGCTTATTGCTAAACACCCTTTAGTGGAAGCCAAGATTCTTGAAGAGATCAGAGATCATTTTAAGACAGATGAAAAGAAAACTGTTGACTGTGGTGATCATGGTTTTCATGAGGACCATCATGATCATAATCTTGATCAAGAACAGTATCTTAAGCAATCTGTATCTGGGGAAGTTTTAGGCATGCAAGAGGTGAAAAAGCTGGTTTATCTGCATGGTGCTTTGTGTGAAGCTCTGAGACTTTTCCCTCCAGTACCCATTGAACGGAAGCAAGCAGTTAAAGCCGACACTCTTCCAAGTGGGCATAGAGTAAATGGCAATACAATGATAATGTTTTCTCTGTATGCGATGGGAAGGTGTGAAGAGATATGGGGAAAAGATTGTTTGGAGTTCAAGCCAGAAAGATGGATATCTGAGAGGGGAGAAATTGTTTATGCACCAGCTTACAAATTCATTGCTTTTAATGCAGGACCAAGAATCTGTTTGGGAAAAGACTTGGCGTTTCTCCAAATGAAGATGGTGGCTGCTGCTATTTTGAGGAAGTACTGTTTCAAAGTGGTGGAAGATCATGTTGCAACTCCAACACATTCCATTGTTCTTCTCATGAAGAACGGTTTGAAGGCTAGGATAATGAAAAGAGAAGTTTGA 1602 0.4313 MAMFLLYAALLASFLCSLYFFHRRTQCIHPLLRDYFILGMLPPVLFNLWRIHDFITEVLKLRGGTGEFKGPWFTKMNYLITCDSLNVQHMLCKRFDNYIKGPEFREIFEPFGDGVVTADSDTWKYFRTVLHSLIKQRRFDVFVDQTVQKKVYTSLLPILDHAQQQGRVVDLQDIFNRFTFDNICSTIVGHDPKCLSIDFPEVAIEKAFNECEESIFYRHVVPGSVWKLQKWLQIGQEKKMTEACRTFDDFIYSCIASKREELSKCSREEMEEAPFDLLTALITEERGRLHDDKFLRDGAFNFFVAGRETMTSALTWFFWLIAKHPLVEAKILEEIRDHFKTDEKKTVDCGDHGFHEDHHDHNLDQEQYLKQSVSGEVLGMQEVKKLVYLHGALCEALRLFPPVPIERKQAVKADTLPSGHRVNGNTMIMFSLYAMGRCEEIWGKDCLEFKPERWISERGEIVYAPAYKFIAFNAGPRICLGKDLAFLQMKMVAAAILRKYCFKVVEDHVATPTHSIVLLMKNGLKARIMKREV 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00123 533 Pfam Cytochrome P450 46 518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00123 533 Gene3D Cytochrome P450 21 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00123 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 472 481 IPR017972 GO:0005506|GO:0016705
Vian8g00123 533 CDD CYP86A 67 524 - -
Vian8g00123 533 PRINTS E-class P450 group I signature 469 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00123 533 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00123 533 PRINTS E-class P450 group I signature 479 502 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00123 533 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00123 533 PANTHER CYTOCHROME P450 22 524 - -
Vian8g00123 533 SUPERFAMILY Cytochrome P450 19 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00123 533 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00123 533 PRINTS P450 superfamily signature 479 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00123 533 PRINTS P450 superfamily signature 470 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00123 533 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00123 Vian-Chr8 1593405 1595006 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00123 13 531 Cytochrome P450 AT4G39490 42.992 8.01e-151 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00123 - - var:108344605 987.252