Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00122 ATGTTACCCACCGTGATCTTCAACTTGTGGCGAGTTCATGATTTTTTCACGGAGGTGCTAACAAAACATGGTGGCACTGGGGAGTTCAAAGGGCCATGGTTCACCAAAATGAACTATTTGGTCACTTGTGACTCCCTCAACGTGCAACACATGCTGTGCAAGCGCTTCGACAACTACATCAAAGGATCCGAGTTTCGTGAGATTTTCGAACCCTTCGGAGATGGGGTTGTCACTGCCGATTCAGAGACATGGAAGTACTTCAGAACCGTTCTCCATTCTTTGATCAAACAAAGAAGGTTCGAAGTGTTTGTTGATCAAACGGTTCAGAAGAAAGTGTACACAAGCCTGCTTCCGATATTGGATCATGCACAACAACAAGGAAGAGTGGTGGATCTTCAGGATATCTTCAACCGATTCACATTCGATAACATATGCTCCACAATCGTAGGACACGATCCTAAGTGTCTTTCCATTGACTTTCCCGAAGTTGCGATCGAAAAGGCTTTTAATGAGTGTGAAGAGTCGATATTCTACAGACACGTAGTGCCGGGAAGTGTTTGGAAGCTCCAAAAATGGCTCCAAATTGGTCAAGAGAAGAAGATGACAGAGGCGTGCAGAACGTTTGACGATTTCATATATTCATGCATAGCGTCCAAGCGAGAAGAGTTAAGCAAGTGCAGCAGAGAAGAAATGGAGGAAGCTCCTTTTGACTTGCTTACTGCTTTGATCACAGAAGAGAGAGGACGTTTGCATGATGACAAGTTTCTAAGAGATGGTGCGTTTAACTTCTTTGTTGCAGGGAGAGAAACCATGACTTCAGCTCTTACGTGGTTCTTTTGGCTTATTGCTAAACACCCTTTAGTGGAAGCCAAGATTCTTGAAGAGATCAGAGATCATTTTAAGACAGATGAAAAGAAAACTGTTGACTGTGGTGATCATGGTTTTCATGAGGACCATCATGATCATAATCTTGATCAAGAACAGTATCTGGAGAAATCTGTATCTGGGGAAGTTTTAGGCATGCAAGAGGTGAAAAAGCTGGTTTATCTGCATGGTGCTTTGTGTGAAGCTCTGAGACTTTTCCCTCCAGTACCCATTGAACGGAAGCAAGCAGTTAAAGCCGACACTCTTCCAAGTGGGCATAGAGTAAATGGCAATACAATGATAATGTTTTCTCTGTATGCGATGGGAAGGTGTGAAGAGATATGGGGAAAAGATTGTTTGGAGTTCAAGCCAGAGAGATGGATATCTGATAGAGGAGAAATTGTTTATGCTCCAGCTTACAAATTTATAGCTTTTAATGCAGGACCAAGAATCTGTTTGGGAAAAGACTTGGCCTTTGTTCAAATGAAGATGGTGGCTGCTGCTATTTTGAGGAAGTACTGTTTCAAAGTGGTGGAAGGTCATGTTGCAACTCCAACACATTCCATTGTTCTTCTCATGAAGAACGGTTTGAAGGCTAGGATTATGAAAAGAGAAGTTTGA 1485 0.4256 MLPTVIFNLWRVHDFFTEVLTKHGGTGEFKGPWFTKMNYLVTCDSLNVQHMLCKRFDNYIKGSEFREIFEPFGDGVVTADSETWKYFRTVLHSLIKQRRFEVFVDQTVQKKVYTSLLPILDHAQQQGRVVDLQDIFNRFTFDNICSTIVGHDPKCLSIDFPEVAIEKAFNECEESIFYRHVVPGSVWKLQKWLQIGQEKKMTEACRTFDDFIYSCIASKREELSKCSREEMEEAPFDLLTALITEERGRLHDDKFLRDGAFNFFVAGRETMTSALTWFFWLIAKHPLVEAKILEEIRDHFKTDEKKTVDCGDHGFHEDHHDHNLDQEQYLEKSVSGEVLGMQEVKKLVYLHGALCEALRLFPPVPIERKQAVKADTLPSGHRVNGNTMIMFSLYAMGRCEEIWGKDCLEFKPERWISDRGEIVYAPAYKFIAFNAGPRICLGKDLAFVQMKMVAAAILRKYCFKVVEGHVATPTHSIVLLMKNGLKARIMKREV 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00122 494 CDD CYP86A 28 485 - -
Vian8g00122 494 PANTHER CYTOCHROME P450 2 485 - -
Vian8g00122 494 Pfam Cytochrome P450 13 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00122 494 Gene3D Cytochrome P450 2 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00122 494 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00122 494 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00122 494 PRINTS E-class P450 group I signature 275 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00122 494 PRINTS E-class P450 group I signature 255 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00122 494 SUPERFAMILY Cytochrome P450 5 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00122 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Vian8g00122 494 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00122 494 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00122 494 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g00122 494 PRINTS P450 superfamily signature 266 283 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00122 Vian-Chr8 1578914 1580398 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00122 1 493 Cytochrome P450 AT2G23180 43.114 2.90e-149 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00122 - - var:108344608 1011.52