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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vian8g00118
ATGGAAAAAGAGGTTGTGGAAAGTCTTTGGAATGGTGACGGAGAATCTCAAATTCAAGCAGCTTTGGAGCTTTGCAGATTAAGCAGTAAGCAGAGGCACAAGTTGGAAGAAAGTAGAGTCATGGTTCCTCTTATTTCCATGCTTCATTCTGAAAACTATGAAGCAATAGAAGCTGCTCTGTGTGCTTTGCTCAGTCTTTCCTTTGGCTCTGAGAGAAACAAGATTCGGATCATCAAATATGGAAGTTTGCCAGTTCTGCTGAGTCTCCTCCATTGTGATAGCCAGAGAGCAGCAGACTTGACTTTGGCAGCCATGCTTACTCTCTCTTCTTGCAAAGCAAATAAGGTAGCAATTGCTTCTTCTGGGGCTGTTCAAATCTTGGTTGGGTTTGTAAACAACAGCAATTATAGCACTCAGTCTCAGCTTGATGCTATTGCTACTCTGCAGAATCTTACAACGTGCAAAGAGATTGTTCCACTGATTGTGTCTTCTGGGGTTATGCTCTCCTTGCTTGAACTGATCCACACCTCAGTAAAATCATCTCCATTGGTTGAGAAAGCAATTGGGTTGCTAGAAAACCTTGTGTCTTCATCAGAGAGTGCATTATGTGAGGTTTCTAGTACTATTGGAGCAATCAGGATACTGGTTGAGACTATAGAAGATGGATCTTCACTGAGCAAAGAGTATGCAGTGTGTATACTTCTCCTTGTATGCCAGAGCTGCAGAGAGAAATATAGAGGGTTGATTTTGACAGAGGGAGTGATGCCAGGGTTGCTTCAGTTGAGTGTGGATGGAACATGGAGAGCCAAATCCATGGCTCGAGAACTGTTGTTGCTTCTGAGGGACTGCTCCAATTATAGCTCAAGATGTAAACAGATTGATCATGAGCTTATAGAAAGGATAATGGATGAAATTGAAGCAGAAGGAGAGGAATTGGCAGATACTACTTTGAGGCTGGTAGAGGAGATGATTGCAAAGCTCCATGCTTAA
990
0.4273
MEKEVVESLWNGDGESQIQAALELCRLSSKQRHKLEESRVMVPLISMLHSENYEAIEAALCALLSLSFGSERNKIRIIKYGSLPVLLSLLHCDSQRAADLTLAAMLTLSSCKANKVAIASSGAVQILVGFVNNSNYSTQSQLDAIATLQNLTTCKEIVPLIVSSGVMLSLLELIHTSVKSSPLVEKAIGLLENLVSSSESALCEVSSTIGAIRILVETIEDGSSLSKEYAVCILLLVCQSCREKYRGLILTEGVMPGLLQLSVDGTWRAKSMARELLLLLRDCSNYSSRCKQIDHELIERIMDEIEAEGEELADTTLRLVEEMIAKLHA
329
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vian8g00118
329
FunFam
U-box domain-containing protein 4
202
318
-
-
Vian8g00118
329
Gene3D
-
135
205
IPR011989
-
Vian8g00118
329
SMART
arm_5
70
110
IPR000225
GO:0005515
Vian8g00118
329
SMART
arm_5
28
68
IPR000225
GO:0005515
Vian8g00118
329
SMART
arm_5
111
153
IPR000225
GO:0005515
Vian8g00118
329
SMART
arm_5
154
196
IPR000225
GO:0005515
Vian8g00118
329
Gene3D
-
3
134
IPR011989
-
Vian8g00118
329
SUPERFAMILY
ARM repeat
4
312
IPR016024
-
Vian8g00118
329
ProSiteProfiles
Armadillo/plakoglobin ARM repeat profile.
165
200
IPR000225
GO:0005515
Vian8g00118
329
ProSiteProfiles
Armadillo/plakoglobin ARM repeat profile.
122
166
IPR000225
GO:0005515
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vian8g00118
Vian-Chr8
1547211
1548651
Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vian8g00118
4
282
U-box Gene Family
AT3G54790
33.216
1.77e-28
114
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vian8g00118
-
-
gmx:100778534
518.464
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