Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00091 ATGGATTCCTCTCTCTCTTTCCACACTCCAACTAACAATGCCATCTCACAACCGGAACAACCGCCGCCTCCACCGCCTCCGCCGCCGCCTCCTAACTCACATTCGCCACCCGCACTCTTAGTTCCCAAACCCGAACCCTTCTGGGCCTCTGACCATGACGATATCGGAGACGAACTCGACCTATTCACTGAGTTCAACCGAGTTACCGAGTTGTTCCACCTTGCCTTCGGACCCACCAATGTCGTCCTTCCCCCCTACTCCTTCGGACCTCAACCTGCTTCACCCACATGCTCCGACCCCCTTCCTGCTGCGGATGTCCATTCGGCGGTTCAGGAACACCCGAATTCGTTGTCCTCCACCAGCGACGCCTCGAGAGCGATCGTCCCCGTGGAGGACCTCACGGTGAGCGTTGCGCCGCCGCGGAAGCAGAGCCGGCAGAAGGAGCTGGTTCGGGTAATGGGTCTGTCGGTGAGGGAACAGGCACAGCTGCGGGAGACGGTGAGGCGCACGCGCTTGGTCGGCGAGGGAGGCGGCAAGGGAGGCGGAATCAAGGAGGAGCAGGAAGAGGAGAAAGTGGTGGAGGGCCGGACTCGACGTCTCCGCGGGGACCTGCGAGCTGCTGGACTGATGCGGGAGCGTGGACTGTGGCTGAACCGGGAGAAGCGAATCGTTGGGGCGATCCCTGGGATTTTGGTGGGGGATTTGTTCCTTTTCAGGATGGAGTTGTGTGTGCTTGGGTTGCACGGTCAGATACAGGCTGGCATTGATTATCTTCCTGCAAGTATGAGCTCCAGTGGGGAGCCTATAGCCACCAGTGTGATTGTTTCTGGGGGTTACGAGGATGATTCTGATAAGGGTGAGCATATATTCTACACTGGTCATGGAGGGCAGGGGAAGAATTCGTCTAAGCAGGTTGCTGATCAGAAGTTGGAGTCAGGGAACCTTGCATTGGAAAGGAGTATGCATTACGGTGTGGAGGTGAGGGTTATTCGTGGGATGAGGTATGAGGGGAGTGCTTCTGCTTCTGGTAAGGTGTATGTGTATGATGGAGTGTATAAGATTACTCAGTGCTTGTTTGATAAGGGGAGGTCTGGTTTTGGGGTTTACAAGTTTAGGCTTTCCAGGGTTGAGGGGCAGGCTAAGATGGGAAGTGCTATTTTGAAGGAAGCTAGGAGTATTAGGAGGAATGAAATGGAATCGAATACTGTTCGTTGTCTTTCTGCTGATATGTCCAACAAGAAGGAGAATGTTCCTGTTCGACTTTTTAACGACATAGATGATGATCGAGATCCTCTTAACTATGAGTATCTTGCCAGGACAAGTTTTCCACAGTTTGTGTTTCATCAGAGTGGGAATGTTACTGGTTGTGACTGTGTGAATGGTTGTGGTGATGGATGCTTTTGTGCTATGAAAAATGGGGGTGATTTTCCTTACACTCTGCAGGGACATCTTGTGAAAGGGAAGCCTTTGATTTTTGAATGTGGCCCTTTTTGTTCTTGTCCTTCTCAGTGTCGTAATCGTGTTTCGCAGAAGGGACTGAAATATAGATTGGAAGTGTTTAGGTCCCTGCAGACATCTTGGGGTGTTAGGTCTCTGGACCTTATTCAAGCCGGTACTTTTATATGCGAGTTTTCTGGGGTTGTTTTGACTAGGGAGCAGGCGCAACTCTTTGCAATGAATGGTGACTCTTCGATATATCCCAATAGGAATGTTGCTTGTTATATGAGCCATAGTTCATCTCCAAATGTTTTGGTTCAGTTTGTTCTGTATGATCACAACAATTTGATGTTCCCACACCTTATGCTATTTGCAATGGAGAATATCCCTCCCATGAGAGAGCTCAGCCTTGATTACGGCGTAGCTGATGAGTGGACAGGGAAGCTCTCTATATGTAAAGCCCATTTCTATCGTTCTACTTTATTGTTTTCACGAATATCTTCCTTTGATTGCATCTTACTTTTGTGTCTGGTACTTTGTTCTGTCTCCGATGCAAACTGTGTGCCGAATCATGGTGAGTTTATGCTTAGAATCATGGTCATTCCGGCTGCTATCTTGCATATCTGCCTTGCTGTATTCAATTTTCTTTCCCCATCCCCCTTGACCTTTCTTTTACTGTCTTGTGAGTTTCGTGCTTGTCTTCTCACATCTTCCCCATTTCTGATGCTGGTCGAGCGTTTTGACTTAACCATGGTTTTCCTAAGGTTTCAACTTCACCAAATTTTGTGGAACTGTGAAAGTGCTTGCTATGTGAACATTTTGTCAAGATCAAGTATTGGAGCTCGGGAAGTTCTTAATCTTGAATACTTGTGTAATTATTCTGTAACAAGAGGTGCCACGCCACCGCTGGAAGATGCGCTGCCTCGGGTACAAGAGCTAACACAGGGGAAGAAGAGGTAA 2397 0.4894 MDSSLSFHTPTNNAISQPEQPPPPPPPPPPPNSHSPPALLVPKPEPFWASDHDDIGDELDLFTEFNRVTELFHLAFGPTNVVLPPYSFGPQPASPTCSDPLPAADVHSAVQEHPNSLSSTSDASRAIVPVEDLTVSVAPPRKQSRQKELVRVMGLSVREQAQLRETVRRTRLVGEGGGKGGGIKEEQEEEKVVEGRTRRLRGDLRAAGLMRERGLWLNREKRIVGAIPGILVGDLFLFRMELCVLGLHGQIQAGIDYLPASMSSSGEPIATSVIVSGGYEDDSDKGEHIFYTGHGGQGKNSSKQVADQKLESGNLALERSMHYGVEVRVIRGMRYEGSASASGKVYVYDGVYKITQCLFDKGRSGFGVYKFRLSRVEGQAKMGSAILKEARSIRRNEMESNTVRCLSADMSNKKENVPVRLFNDIDDDRDPLNYEYLARTSFPQFVFHQSGNVTGCDCVNGCGDGCFCAMKNGGDFPYTLQGHLVKGKPLIFECGPFCSCPSQCRNRVSQKGLKYRLEVFRSLQTSWGVRSLDLIQAGTFICEFSGVVLTREQAQLFAMNGDSSIYPNRNVACYMSHSSSPNVLVQFVLYDHNNLMFPHLMLFAMENIPPMRELSLDYGVADEWTGKLSICKAHFYRSTLLFSRISSFDCILLLCLVLCSVSDANCVPNHGEFMLRIMVIPAAILHICLAVFNFLSPSPLTFLLLSCEFRACLLTSSPFLMLVERFDLTMVFLRFQLHQILWNCESACYVNILSRSSIGAREVLNLEYLCNYSVTRGATPPLEDALPRVQELTQGKKR 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00091 798 MobiDBLite consensus disorder prediction 1 15 - -
Vian8g00091 798 SMART preset_2 407 499 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vian8g00091 798 Pfam Pre-SET motif 410 507 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vian8g00091 798 SMART set_7 515 625 IPR001214 GO:0005515
Vian8g00091 798 Pfam SET domain 560 619 IPR001214 GO:0005515
Vian8g00091 798 MobiDBLite consensus disorder prediction 1 51 - -
Vian8g00091 798 ProSiteProfiles YDG domain profile. 225 375 IPR003105 -
Vian8g00091 798 SMART G9a_1 220 379 IPR003105 -
Vian8g00091 798 SUPERFAMILY Formin homology 2 domain (FH2 domain) 21 72 - -
Vian8g00091 798 ProSiteProfiles SET domain profile. 515 619 IPR001214 GO:0005515
Vian8g00091 798 MobiDBLite consensus disorder prediction 16 43 - -
Vian8g00091 798 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 116 632 - -
Vian8g00091 798 Gene3D - 222 383 IPR036987 -
Vian8g00091 798 SUPERFAMILY SET domain 404 631 IPR046341 -
Vian8g00091 798 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 66 649 IPR025794 GO:0016571
Vian8g00091 798 Pfam SAD/SRA domain 224 379 IPR003105 -
Vian8g00091 798 Gene3D SET domain 384 632 IPR046341 -
Vian8g00091 798 ProSiteProfiles Pre-SET domain profile. 454 512 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vian8g00091 798 SUPERFAMILY PUA domain-like 206 393 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00091 Vian-Chr8 1264348 1271007 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00091 201 621 Su(var)3-9 homologs AT5G04940 38.889 1.35e-97 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vian8g00091 SAD_SRA 1.4e-46 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00091 K11420 - pvu:PHAVU_003G282200g 924.85