Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00086 ATGCAAACTCTTCTTTCTCTGTCACACTCTCCTTCAACTCCACACTTTCCAAACTTCACACCAAGGCAAAAGTTCCTTCCTCAACTCCACTCCTTCAATACCTTCTCCTTGCCCCCATCTTCTCCTTTGCACCTCACTGCCACAAAGTCTCCACCTTTCTTCATTTCTTCTCCCAAGCTTGCATCTTTCAGGCTCCTTGCTGCTTCTATCTCTGATGCCAGAAGTGATGAACCAGCCAAAGCTAGTGAGTTGGTTAAGACCCTGCAGCTAGGAGCCATGCTTGCCCTTTGGTACCTCTTGAACATCTACTTCAACATCTACAACAAGCAGGTTCTGAAAGTCTATCCATTTCCAGCAACAGTTACAGCATTTCAATTTGGCTTTGTGTCACTGGTGATTAATTTAATCTGGACTTTCAATCTCCACCCCAGACCAAGCATCAGAGGTTCACAGCTTGCAACACTCCTTCCACTGGCTCTGGCTCACACATTAGGGAATGTCTTGACCAACATTAGTCTTTGCAAGGTTGCTGTATCTTTCACTCACACAATCAAAGCTATGGAGCCTTTCTTTACTGTTCTTCTTTCTGCTCTTTTCTTGGGTCAGATGCCTACTTTCTGGGTGTTTTCTTCCCTTATACCAATAGTTGGAGGAGTGGCGTTGGCATCAATGACTGAAGTCTCTTTCAATTGGATTGGCTTCATCACTGCTATGGCAGCTAACGTTACAAATCAATCAAGGAACGTTTTGAGCAAAAAAATGATGACTAGTGAAGAGGAAAGTTTGGACATTATCAATCTCTATGGAGTTTTAACAATGATTTCCTTCATGTTTTTGGTTCCCTATGCCTTACTTGTGGAGGGTGTCAAGTTTTCTCCTTCATACCTGCAATATGCAGCAAGCCAAGGGCTGAATGTTAGAGAGTTATGTGTCAGAGCAATTTTTTCAGCATTCTGCTTCCATGCATACCAACAGGTTTCATATATGATATTGGAGATTGTGTCACCTGTGACACACTCAGTTGCAAACAGTGTGAAGCGTGTGGTTATCATTGTTTCTTCAGTCATCTTCTTCCAAACTCCTGTCTCTCCTGTTAATGCACTTGGAACTGCTATTGCTCTTGTTGGAGTTTTCTTGTACTCAAGGGCAAAGAGGATTAAGCCTGTGCAAAAGACAAACTGA 1182 0.4289 MQTLLSLSHSPSTPHFPNFTPRQKFLPQLHSFNTFSLPPSSPLHLTATKSPPFFISSPKLASFRLLAASISDARSDEPAKASELVKTLQLGAMLALWYLLNIYFNIYNKQVLKVYPFPATVTAFQFGFVSLVINLIWTFNLHPRPSIRGSQLATLLPLALAHTLGNVLTNISLCKVAVSFTHTIKAMEPFFTVLLSALFLGQMPTFWVFSSLIPIVGGVALASMTEVSFNWIGFITAMAANVTNQSRNVLSKKMMTSEEESLDIINLYGVLTMISFMFLVPYALLVEGVKFSPSYLQYAASQGLNVRELCVRAIFSAFCFHAYQQVSYMILEIVSPVTHSVANSVKRVVIIVSSVIFFQTPVSPVNALGTAIALVGVFLYSRAKRIKPVQKTN 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00086 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 129 225 - -
Vian8g00086 393 Pfam Triose-phosphate Transporter family 88 381 IPR004853 -
Vian8g00086 393 PANTHER SOLUTE CARRIER FAMILY 35 90 385 - -
Vian8g00086 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 306 385 - -
Vian8g00086 393 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 88 390 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00086 Vian-Chr8 1208589 1212019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00086 63 392 Antiporters AT5G33320 60.909 3.00e-137 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00086 K15283 - gmx:100819280 580.096