Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00043 ATGGGTGAGAGAAGACACATTTTTGCAGTGACAATGGTGGTTCTTAGTATGTTGGTGGTTTCAACAGAGATGGTTTATGGAAAGCTGTTTTATGTCGGGAAAAAAGATGGAACATGCTTACAAGACGTATGTTGGGCCAATGGAATCAGTGATTGGCCTAAAAACAAGACCATTAAAGCTGGAGATATTCTAGTATTCAATTACGATCTTTTTACGCGTGATGTTACTCTTGTGGACGAGGAAGGATACAGAACATGTAATCCTGGAAAAAATCCAATAGTGTATCGGACAGGACATGATTATATTCAAGTTCCAGAAGGACCAAGTTACTACATTTGTAGTATCAATCGTCTCTGCCAAAAAGGAACCAAAGTTGCGATCATTCCAGCATAA 393 0.3893 MGERRHIFAVTMVVLSMLVVSTEMVYGKLFYVGKKDGTCLQDVCWANGISDWPKNKTIKAGDILVFNYDLFTRDVTLVDEEGYRTCNPGKNPIVYRTGHDYIQVPEGPSYYICSINRLCQKGTKVAIIPA 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00043 130 SUPERFAMILY Cupredoxins 30 128 IPR008972 -
Vian8g00043 130 PANTHER BLUE COPPER PROTEIN 29 127 IPR039391 GO:0009055
Vian8g00043 130 Gene3D - 40 128 IPR008972 -
Vian8g00043 130 Pfam Plastocyanin-like domain 50 122 IPR003245 GO:0009055
Vian8g00043 130 CDD Plantacyanin 22 129 IPR041844 -
Vian8g00043 130 ProSiteProfiles Phytocyanin domain profile. 28 130 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00043 Vian-Chr8 613716 614193 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00043 52 127 Phytocyanin Superfamily AT1G17800 38.961 7.60e-11 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00043 - - pvu:PHAVU_004G014900g 207.994