Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00029 ATGGCTTCTAGAATTCTTTCCACTCTGCAGAATGTGTCTTCTTCTTCTTCTTTTGTCTCAACCACTAAACGTTGCTTAGGCCTATGTTGTCTCCGGCATAGAAGTTTAAGTGGAACTGGTGCTTCTGCTGCTGCTGACATAGAGCCTAGCAAACCACCAGTGCAAATTGAGCATAATCAGCTTCTGATCGATGGACTGTTTGTTGATGCAGCTTCTGGAAAAACTTTTCCAACCAATGATCCTAGGACTGGAGATACAATTGCCAATGTAGCCGAAGCGGATGTTGAAGATGTAAATCGTGCTGTACGTGCTGCTCGCAAGGCTTTTGATGAGGGACCATGGCCAAAAATGACAGCTTATGAAAGATCACAAATAATTTTGCGTTGTGCTGATATATTGGAGAAACACAATGATGAAGTTGCAGCAATTGAAACATGGGATAATGGGAAGCCTTATGAACAGGCTTCAAATGTTGAAATACCTATGGTGGTACGCTTGTTCCGATATTATGCAGGTTGGGCGGATAAAATTCATGGTTTAACAGTTCCAGCTGATGGACCATACCATGTTCAAACCTTGCATGAACCTATTGGAGTAGCAGGGCAGATTGTTCCTTGGAATTTCCCACTTCTTATTTTTTCATGGAAGGTTGCACCTGCATTAGCTTGTGGTAATACAGTTGTAATGAAAACTGCAGAACAGACACCCCTTTCTGCCATTTATGTGTCAAAGCTATTTCATGAGGCAGGACTTCCTCCTGGAGTTCTGAATGTTATCAGTGGCTTTGGTCCTACTGCTGGGGCAGCTCTGTGTACTCATATGGATGTTGACAAGCTTGCTTTCACAGGATCCTCTCAGACCGGTAGACGGGTATTAGAACTCTCAGCACGCAGTAACCTGAAGCCTGTAACTCTGGAGCTGGGTGGAAAATCTCCATTCATTGTCTGCAAGGATGCTGATATCGATGCAGCTGTTGAGGCAGCACATTCTGCGTTATTCTTTAATCAGGGGCAATGTTGTTGTGCTGGTTCTCGCACATTTGTTCATGAAAGCATATATGATGAATTTGTGGAAAAGGCTAAAGCTCGTGCTACTAAACGTGTGGTTGGAGACCCTTTCAAAAGTGGGGTTGAGCAAGGTCCTCAGATTGATTTTGCACAATTCGAGAAGATCATGAAATACATAAGATCAGGCATTGAAAGTGGTGCTAAACTGGAATCTGGTGGTCAAAGAGTTGGCTCGAAAGGCTACTACATCGAACCAACTGTTTTCTCAAATGACGACATGTTGATAGCAAAAGATGAGATATTCGGTCCGGTACAATCTATCCTGAAATTCAAGGATCTAGAGGAGGTGATAAGAAGGGCCAATGCAACTCATTATGGCCTGGCTGCTGGAGTTTATACTCAGAATACAGACACTGCCAATACCTTGATGCGGGCATTGCGAGTTGGAACAGTATGGATCAACTGCTATGATGTCTTTGATGCAGCAATACCTTTTGGTGGATATAAAATGAGTGGTCAAGGGAGAGTAAGGGGAATCTACAGCCTTAGAAGCTACCTTCAAGTTAAAGCTTTTGTCACTCCTTTGAAGAATCCTGCATGGCTCTAG 1614 0.4337 MASRILSTLQNVSSSSSFVSTTKRCLGLCCLRHRSLSGTGASAAADIEPSKPPVQIEHNQLLIDGLFVDAASGKTFPTNDPRTGDTIANVAEADVEDVNRAVRAARKAFDEGPWPKMTAYERSQIILRCADILEKHNDEVAAIETWDNGKPYEQASNVEIPMVVRLFRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIVPWNFPLLIFSWKVAPALACGNTVVMKTAEQTPLSAIYVSKLFHEAGLPPGVLNVISGFGPTAGAALCTHMDVDKLAFTGSSQTGRRVLELSARSNLKPVTLELGGKSPFIVCKDADIDAAVEAAHSALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARATKRVVGDPFKSGVEQGPQIDFAQFEKIMKYIRSGIESGAKLESGGQRVGSKGYYIEPTVFSNDDMLIAKDEIFGPVQSILKFKDLEEVIRRANATHYGLAAGVYTQNTDTANTLMRALRVGTVWINCYDVFDAAIPFGGYKMSGQGRVRGIYSLRSYLQVKAFVTPLKNPAWL 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00029 537 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 45 526 - -
Vian8g00029 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 63 525 IPR016162 GO:0016491
Vian8g00029 537 FunFam Mitochondrial aldehyde dehydrogenase 2 311 498 - -
Vian8g00029 537 Coils Coil 88 108 - -
Vian8g00029 537 SUPERFAMILY ALDH-like 55 530 IPR016161 GO:0016491
Vian8g00029 537 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 333 344 IPR016160 GO:0016491
Vian8g00029 537 CDD ALDH_F2BC 56 529 - -
Vian8g00029 537 Pfam Aldehyde dehydrogenase family 67 526 IPR015590 GO:0016491
Vian8g00029 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 309 496 IPR016163 GO:0016620
Vian8g00029 537 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 305 312 IPR029510 GO:0016491
Vian8g00029 537 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 63 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00029 Vian-Chr8 422507 426012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00029 1 537 Aldehyde Dehydrogenase Gene Family AT3G48000 71.455 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00029 K00128 - gmx:100798892 942.569